Detail Information

Basic Information:


  VIRBase ID:  

VHID00019377

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 CLVS2
miRBase
Accession/Entrez ID		 zikv-mir-2 134829
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - bA160A10.4//C6orf212//C6orf213//RLBP1L2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CLVS2
chr6:123378762(+) A-I      intronic
chr6:123382270(+) A-I      intronic
chr6:123382303(+) A-I      intronic
chr6:123382214(+) A-I      intronic
chr6:123378578(+) A-I      intronic
chr6:123374495(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CLVS2
chr6:123318461-123318462(+) m6A 5'UTR//intron       22608085
chr6:123318470-123318471(+) m6A 5'UTR//intron       22608085
chr6:123318542-123318543(+) m6A 5'UTR//intron       22608085
chr6:123318560-123318561(+) m6A 5'UTR//intron       22608085
chr6:123318609-123318610(+) m6A 5'UTR//intron       22608085
chr6:123318777-123318778(+) m6A 5'UTR//intron       22608085
chr6:123318858-123318859(+) m6A 5'UTR//intron       25456834//22608085
chr6:123318875-123318876(+) m6A 5'UTR//intron       25456834//22608085
chr6:123318919-123318920(+) m6A 5'UTR//intron       25456834//22575960//22608085
chr6:123318955-123318956(+) m6A CDS//intron       25456834//22575960//22608085
chr6:123318989-123318990(+) m6A CDS//intron       25456834//22575960//22608085
chr6:123318995-123318996(+) m6A CDS//intron       25456834//22575960//22608085
chr6:123319010-123319011(+) m6A CDS//intron       25456834//22575960//22608085
chr6:123319049-123319050(+) m6A CDS//intron       25456834//22575960//22608085
chr6:123319166-123319167(+) m6A CDS//intron       25456834//22608085
chr6:123319172-123319173(+) m6A CDS//intron       25456834//22608085
chr6:123384877-123384878(+) m6A CDS       22608085
chr6:123384901-123384902(+) m6A CDS       22608085
chr6:123384967-123384968(+) m6A 3'UTR       22575960//22608085
chr6:123384997-123384998(+) m6A 3'UTR       22575960//22608085
chr6:123385060-123385061(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CLVS2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: CLVS2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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