Detail Information

Basic Information:


  VIRBase ID:  

VHID00018259

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 STARD3NL
miRBase
Accession/Entrez ID		 zikv-mir-2 83930
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - MENTHO

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR STARD3NL
chr7:38259446(+) A-I      intronic
chr7:38259451(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED STARD3NL
chr7:38261010(+) A-G intron -    22484847
chr7:38241436(+) G-C intron -    22484847
chr7:38241437(+) C-T intron -    22484847
chr7:38241438(+) A-T intron -    22484847
chr7:38259413(+) A-G intron -    22484847
chr7:38259419(+) A-G intron -    22484847
chr7:38259447(+) A-G intron -    22484847
chr7:38260934(+) A-G intron -    22484847
chr7:38260936(+) A-G intron -    22484847
chr7:38260937(+) A-G intron -    22484847
chr7:38260943(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase STARD3NL
chr7:38217911-38217912(+) m6A 5'UTR       24981863
chr7:38218009-38218010(+) m6A 5'UTR//exon       24981863
chr7:38247109-38247110(+) m6A CDS//exon       24284625
chr7:38247124-38247125(+) m6A CDS//exon       24284625
chr7:38247264-38247265(+) m6A CDS//exon       24284625//24981863//27773535
chr7:38253976-38253977(+) m6A CDS//exon       27773535
chr7:38269714-38269715(+) Y 3'UTR//exon       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate STARD3NL
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: STARD3NL

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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