Detail Information

Basic Information:


  VIRBase ID:  

VHID00017421

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 BLOC1S5
miRBase
Accession/Entrez ID		 zikv-mir-2 63915
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - BLOS5//HPS11//MU//MUTED

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BLOC1S5
chr6:8014631(-) A-I      3'UTR
chr6:8014686(-) A-I      3'UTR
chr6:8014689(-) A-I      3'UTR
chr6:8014753(-) A-I      3'UTR
chr6:8014622(-) A-I      3'UTR
chr6:8014613(-) A-I      3'UTR
chr6:8014747(-) A-I      3'UTR
chr6:8014639(-) A-I      3'UTR
chr6:8014763(-) A-I      3'UTR
chr6:8014773(-) A-I      3'UTR
chr6:8014542(-) A-I      3'UTR
chr6:8014554(-) A-I      3'UTR
chr6:8014574(-) A-I      3'UTR
chr6:8014579(-) A-I      3'UTR
chr6:8014612(-) A-I      3'UTR
chr6:8014779(-) A-I      3'UTR
chr6:8014604(-) A-I      3'UTR
chr6:8014609(-) A-I      3'UTR
chr6:8014678(-) A-I      3'UTR
chr6:8014700(-) A-I      3'UTR
chr6:8014734(-) A-I      3'UTR
chr6:8014635(-) A-I      3'UTR
chr6:8014567(-) A-I      3'UTR
chr6:8014645(-) A-I      3'UTR
chr6:8014671(-) A-I      3'UTR
chr6:8014780(-) A-I      3'UTR
chr6:8014674(-) A-I      3'UTR
chr6:8014786(-) A-I      3'UTR
chr6:8014529(-) A-I      3'UTR
chr6:8014738(-) A-I      3'UTR
chr6:8014676(-) A-I      3'UTR
chr6:8014675(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BLOC1S5
chr6:8013973-8013974(-) m6A 3'UTR       24981863//27773535
chr6:8014111-8014112(-) m6A 3'UTR       24981863//27773535//22608085
chr6:8014180-8014181(-) m6A 3'UTR       24981863//27773535//22608085
chr6:8014429-8014430(-) m6A 3'UTR       24981863//27773535//22608085
chr6:8014471-8014472(-) m6A 3'UTR       24981863//27773535//22608085
chr6:8014498-8014499(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr6:8014533-8014534(-) m6A 3'UTR       25456834//24981863//22608085
chr6:8014602-8014603(-) m6A 3'UTR       24981863//22608085
chr6:8015564-8015565(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr6:8015577-8015578(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr6:8015809-8015810(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr6:8015823-8015824(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr6:8015856-8015857(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr6:8015872-8015873(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr6:8015878-8015879(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr6:8015906-8015907(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr6:8015929-8015930(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr6:8016008-8016009(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr6:8016028-8016029(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr6:8018050-8018051(-) m6A exon//intron       24284625//24209618//24981863//27773535//27371828//22608085
chr6:8026614-8026615(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27773536//22608085
chr6:8026629-8026630(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27773536//22608085
chr6:8041397-8041398(-) m6A 3'UTR//CDS//exon       27773535
chr6:8041409-8041410(-) m6A 3'UTR//CDS//exon       27773535
chr6:8041432-8041433(-) m6A 3'UTR//CDS//exon       27773535
chr6:8041440-8041441(-) m6A 3'UTR//CDS//exon       27773535
chr6:8041454-8041455(-) m6A 3'UTR//CDS//exon       27773535
chr6:8064538-8064539(-) m6A CDS       24981863
chr6:8064587-8064588(-) m6A CDS       24981863
chr6:8064593-8064594(-) m6A CDS       24981863
chr6:8064618-8064619(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BLOC1S5
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: BLOC1S5

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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