Detail Information

Basic Information:


  VIRBase ID:  

VHID00016192

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 INPP5K
miRBase
Accession/Entrez ID
zikv-mir-2 51763
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - MDCCAID//PPS//SKIP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR INPP5K
chr17:1417454(-) A-I      intronic
chr17:1417495(-) A-I      intronic
chr17:1417482(-) A-I      intronic
chr17:1417468(-) A-I      intronic
chr17:1417447(-) A-I      intronic
chr17:1401971(-) A-I      intronic
chr17:1402020(-) A-I      intronic
chr17:1402050(-) A-I      intronic
chr17:1402638(-) A-I      intronic
chr17:1402639(-) A-I      intronic
chr17:1402700(-) A-I      intronic
chr17:1402711(-) A-I      intronic
chr17:1402724(-) A-I      intronic
chr17:1402756(-) A-I      intronic
chr17:1402779(-) A-I      intronic
chr17:1406244(-) A-I      intronic
chr17:1406610(-) A-I      intronic
chr17:1406642(-) A-I      intronic
chr17:1406646(-) A-I      intronic
chr17:1406888(-) A-I      intronic
chr17:1406965(-) A-I      intronic
chr17:1406968(-) A-I      intronic
chr17:1407007(-) A-I      intronic
chr17:1417425(-) A-I      intronic
chr17:1418476(-) A-I      intronic
chr17:1417451(-) A-I      intronic
chr17:1418484(-) A-I      intronic
chr17:1417510(-) A-I      intronic
chr17:1417517(-) A-I      intronic
chr17:1418369(-) A-I      intronic
chr17:1418374(-) A-I      intronic
chr17:1418470(-) A-I      intronic
chr17:1418475(-) A-I      intronic
chr17:1406622(-) A-I      intronic
chr17:1401972(-) A-I      intronic
chr17:1417469(-) A-I      intronic
chr17:1404431(-) A-I      intronic
chr17:1406088(-) A-I      intronic
chr17:1405531(-) A-I      intronic
chr17:1418420(-) A-I      intronic
chr17:1404393(-) A-I      intronic
chr17:1400711(-) A-I      intronic
chr17:1406973(-) A-I      intronic
chr17:1403281(-) A-I      intronic
chr17:1405583(-) A-I      intronic
chr17:1417534(-) A-I      intronic
chr17:1406550(-) A-I      intronic
chr17:1406362(-) A-I      intronic
chr17:1402735(-) A-I      intronic
chr17:1417373(-) A-I      intronic
chr17:1406332(-) A-I      intronic
chr17:1400643(-) A-I      intronic
chr17:1406616(-) A-I      intronic
chr17:1418365(-) A-I      intronic
chr17:1401977(-) A-I      intronic
chr17:1402624(-) A-I      intronic
chr17:1410972(-) A-I      intronic
chr17:1406373(-) A-I      intronic
chr17:1403318(-) A-I      intronic
chr17:1406894(-) A-I      intronic
chr17:1406955(-) A-I      intronic
chr17:1402785(-) A-I      intronic
chr17:1406144(-) A-I      intronic
chr17:1404391(-) A-I      intronic
chr17:1405253(-) A-I      intronic
chr17:1417530(-) A-I      intronic
chr17:1418329(-) A-I      intronic
chr17:1401996(-) A-I      intronic
chr17:1405387(-) A-I      intronic
chr17:1405282(-) A-I      intronic
chr17:1405207(-) A-I      intronic
chr17:1418297(-) A-I      intronic
chr17:1417615(-) A-I      intronic
chr17:1403819(-) A-I      intronic
chr17:1418372(-) A-I      intronic
chr17:1418431(-) A-I      intronic
chr17:1417505(-) A-I      intronic
chr17:1402704(-) A-I      intronic
chr17:1406096(-) A-I      intronic
chr17:1405201(-) A-I      intronic
chr17:1403366(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase INPP5K
chr17:1398015-1398016(-) m6A 3'UTR       24284625//27773535//22608085
chr17:1398065-1398066(-) m6A 3'UTR       24284625//24209618//25456834//27773535//22608085
chr17:1398135-1398136(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085
chr17:1398157-1398158(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085
chr17:1398194-1398195(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr17:1398205-1398206(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr17:1398235-1398236(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr17:1398245-1398246(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr17:1398326-1398327(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr17:1398430-1398431(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085
chr17:1398689-1398690(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr17:1398855-1398856(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr17:1398863-1398864(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr17:1398888-1398889(-) m6A 3'UTR       24284625//24981863//27773535
chr17:1399968-1399969(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:1399978-1399979(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:1399999-1400000(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:1400042-1400043(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:1400050-1400051(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:1401390-1401391(-) m6A 3'UTR//CDS//exon       -
chr17:1410294-1410295(-) m6A 3'UTR//CDS//exon//intron       -
chr17:1410365-1410366(-) m6A 3'UTR//CDS//exon//intron       -
chr17:1410401-1410402(-) m6A exon//intron       -
chr17:1412477-1412478(-) m6A 3'UTR//CDS//exon//intron       -
chr17:1412486-1412487(-) m6A 3'UTR//CDS//exon//intron       -
chr17:1412495-1412496(-) m6A 3'UTR//CDS//exon//intron       -
chr17:1419818-1419819(-) m6A 5'UTR       24981863//27371828//27773536
chr17:1419827-1419828(-) m6A 5'UTR       24981863//27371828//27773536
chr17:1419849-1419850(-) m6A 5'UTR       24981863//27371828//27773536
chr17:1419880-1419881(-) m6A 5'UTR       24981863//27371828//27773536
chr17:1419907-1419908(-) m6A 5'UTR       24981863//27371828//27773536
chr17:1419989-1419990(-) m6A 5'UTR       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate INPP5K
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: INPP5K

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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