Detail Information

Basic Information:


  VIRBase ID:  

VHID00015885

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 NSDHL
miRBase
Accession/Entrez ID		 zikv-mir-2 50814
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - H105E3//SDR31E1//XAP104

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NSDHL
chrX:152015675(+) A-I      intronic
chrX:152015696(+) A-I      intronic
chrX:152015718(+) A-I      intronic
chrX:152015720(+) A-I      intronic
chrX:152015804(+) A-I      intronic
chrX:152023306(+) A-I      intronic
chrX:152015716(+) A-I      intronic
chrX:152032630(+) A-I      intronic
chrX:152025521(+) A-I      intronic
chrX:152023188(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NSDHL
chrX:151999639-151999640(+) m6A 5'UTR       24284625//24209618//24981863
chrX:152014850-152014851(+) m6A 5'UTR       24284625
chrX:152014873-152014874(+) m6A CDS       24284625
chrX:152014899-152014900(+) m6A CDS       27773535
chrX:152014913-152014914(+) m6A CDS       27773535
chrX:152014929-152014930(+) m6A CDS       27773535
chrX:152034441-152034442(+) m6A CDS       24284625
chrX:152036197-152036198(+) m6A CDS       24284625//24981863
chrX:152037366-152037367(+) m6A CDS       24284625//24981863
chrX:152037621-152037622(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chrX:152037663-152037664(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chrX:152037764-152037765(+) Y 3'UTR       26075521
chrX:152037826-152037827(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chrX:152037849-152037850(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chrX:152038119-152038120(+) m6A 3'UTR       24981863
chrX:152038145-152038146(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NSDHL
Chromatin K562 cells     -
Cytosol K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: NSDHL

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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