Detail Information

Basic Information:


  VIRBase ID:  

VHID00015693

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 UBE2S
miRBase
Accession/Entrez ID		 zikv-mir-2 27338
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - E2-EPF//E2EPF//EPF5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBE2S
chr19:55915041(-) A-I      intronic
chr19:55916190(-) A-I      intronic
chr19:55914775(-) A-I      intronic
chr19:55914702(-) A-I      intronic
chr19:55916243(-) A-I      intronic
chr19:55916836(-) A-I      intronic
chr19:55914787(-) A-I      intronic
chr19:55916454(-) A-I      intronic
chr19:55916252(-) A-I      intronic
chr19:55914717(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBE2S
chr19:55916170(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBE2S
chr19:55912805-55912806(-) Y CDS       26075521
chr19:55912831-55912832(-) m6A CDS       24981863//27371828//27773536
chr19:55913053-55913054(-) m6A CDS       27371828//27773536
chr19:55915301-55915302(-) m6A exon//intron       27773535//27371828//27773536
chr19:55915324-55915325(-) m6A exon//intron       27773535//27371828//27773536
chr19:55915377-55915378(-) m6A exon//intron       27773535//27371828//27773536
chr19:55915671-55915672(-) Y 3'UTR//CDS       26075521
chr19:55915791-55915792(-) m6A CDS//intron       -
chr19:55915808-55915809(-) m6A CDS//intron       27773536
chr19:55915840-55915841(-) m6A CDS//intron       27773536
chr19:55918217-55918218(-) m6A CDS       27773536
chr19:55918256-55918257(-) m6A CDS       27371828//27773536
chr19:55918313-55918314(-) m6A CDS       24209618//24981863//27371828//27773536
chr19:55918980-55918981(-) m6A 5'UTR       24209618//24981863//27371828//27773536//22575960
chr19:55919010-55919011(-) m6A 5'UTR       24209618//24981863//27371828//27773536//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UBE2S
Chromatin K562 cells     -
Exosome HeLa cells     24205503
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: UBE2S

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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