Detail Information

Basic Information:


  VIRBase ID:  

VHID00014139

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 DLGAP5
miRBase
Accession/Entrez ID		 zikv-mir-2 9787
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - DLG7//HURP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DLGAP5
chr14:55640108(-) A-I      intronic
chr14:55639457(-) A-I      intronic
chr14:55653812(-) A-I      intronic
chr14:55655475(-) A-I      intronic
chr14:55652950(-) A-I      intronic
chr14:55622339(-) A-I      intronic
chr14:55622233(-) A-I      intronic
chr14:55622203(-) A-I      intronic
chr14:55639560(-) A-I      intronic
chr14:55639537(-) A-I      intronic
chr14:55622127(-) A-I      intronic
chr14:55621853(-) A-I      intronic
chr14:55639445(-) A-I      intronic
chr14:55621840(-) A-I      intronic
chr14:55650983(-) A-I      intronic
chr14:55650825(-) A-I      intronic
chr14:55639438(-) A-I      intronic
chr14:55652082(-) A-I      intronic
chr14:55638803(-) A-I      intronic
chr14:55634921(-) A-I      intronic
chr14:55652098(-) A-I      intronic
chr14:55650824(-) A-I      intronic
chr14:55650785(-) A-I      intronic
chr14:55629179(-) A-I      intronic
chr14:55652190(-) A-I      intronic
chr14:55652252(-) A-I      intronic
chr14:55652281(-) A-I      intronic
chr14:55629148(-) A-I      intronic
chr14:55652786(-) A-I      intronic
chr14:55628193(-) A-I      intronic
chr14:55650705(-) A-I      intronic
chr14:55652738(-) A-I      intronic
chr14:55638826(-) A-I      intronic
chr14:55628190(-) A-I      intronic
chr14:55644964(-) A-I      intronic
chr14:55627456(-) A-I      intronic
chr14:55627433(-) A-I      intronic
chr14:55627277(-) A-I      intronic
chr14:55627037(-) A-I      intronic
chr14:55622790(-) A-I      intronic
chr14:55622757(-) A-I      intronic
chr14:55644861(-) A-I      intronic
chr14:55622752(-) A-I      intronic
chr14:55652817(-) A-I      intronic
chr14:55622746(-) A-I      intronic
chr14:55626703(-) A-I      intronic
chr14:55641547(-) A-I      intronic
chr14:55622714(-) A-I      intronic
chr14:55650946(-) A-I      intronic
chr14:55641525(-) A-I      intronic
chr14:55622687(-) A-I      intronic
chr14:55622669(-) A-I      intronic
chr14:55622357(-) A-I      intronic
chr14:55622202(-) A-I      intronic
chr14:55652196(-) A-I      intronic
chr14:55650919(-) A-I      intronic
chr14:55639545(-) A-I      intronic
chr14:55622617(-) A-I      intronic
chr14:55639534(-) A-I      intronic
chr14:55627344(-) A-I      intronic
chr14:55640130(-) A-I      intronic
chr14:55627303(-) A-I      intronic
chr14:55650776(-) A-I      intronic
chr14:55650668(-) A-I      intronic
chr14:55634938(-) A-I      intronic
chr14:55629335(-) A-I      intronic
chr14:55627343(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DLGAP5
chr14:55644005-55644006(-) m6A CDS       24981863//27773535
chr14:55646355-55646356(-) m6A CDS       24981863//28052920//27773535
chr14:55646360-55646361(-) m6A CDS       24981863//28052920//27773535
chr14:55646379-55646380(-) m6A CDS       24981863//28052920//27773535
chr14:55646409-55646410(-) m6A CDS       24981863//28052920//27773535
chr14:55647421-55647422(-) m6A CDS       24981863//28052920//27773535
chr14:55647944-55647945(-) m6A CDS       27773535
chr14:55647966-55647967(-) m6A CDS       27773535
chr14:55655792-55655793(-) m6A CDS       24981863
chr14:55655836-55655837(-) m6A CDS       24981863
chr14:55657861-55657862(-) m6A 5'UTR//intron       24209618
chr14:55658235-55658236(-) m6A 5'UTR       24209618//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DLGAP5
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: DLGAP5

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...