Detail Information

Basic Information:


  VIRBase ID:  

VHID00012047

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 RPL10A
miRBase
Accession/Entrez ID		 zikv-mir-2 4736
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - Csa-19//CSA19//L10A//NEDD6

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RPL10A
chr6:35436535-35436536(+) m6A exon//intron       -
chr6:35436631-35436632(+) m6A CDS//exon       22575960
chr6:35436761-35436762(+) m6A CDS//exon       22575960
chr6:35436779-35436780(+) m6A CDS//exon       22575960
chr6:35436952-35436953(+) m6A exon//intron       -
chr6:35436973-35436974(+) m6A exon//intron       -
chr6:35437111-35437112(+) m6A exon//intron       22575960
chr6:35437204-35437205(+) m6A CDS//exon       22575960
chr6:35437252-35437253(+) m6A CDS//exon       27773535//22575960
chr6:35437271-35437272(+) m6A CDS//exon       27773535//22575960
chr6:35437289-35437290(+) m6A CDS//exon       27773535//22575960
chr6:35438072-35438073(+) m6A CDS//exon       27773535
chr6:35438462-35438463(+) m6A CDS//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RPL10A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: RPL10A

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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