Detail Information

Basic Information:


  VIRBase ID:  

VHID00011074

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 EWSR1
miRBase
Accession/Entrez ID		 zikv-mir-2 2130
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - bK984G1.4//EWS//EWS-FLI1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EWSR1
chr22:29682523(+) A-I      intronic
chr22:29682009(+) A-I      intronic
chr22:29683946(+) A-I      intronic
chr22:29690817(+) A-I      intronic
chr22:29682526(+) A-I      intronic
chr22:29681982(+) A-I      intronic
chr22:29689159(+) A-I      intronic
chr22:29682012(+) A-I      intronic
chr22:29680848(+) A-I      intronic
chr22:29682593(+) A-I      intronic
chr22:29682588(+) A-I      intronic
chr22:29682631(+) A-I      intronic
chr22:29682636(+) A-I      intronic
chr22:29682651(+) A-I      intronic
chr22:29688774(+) A-I      intronic
chr22:29688863(+) A-I      intronic
chr22:29689090(+) A-I      intronic
chr22:29689155(+) A-I      intronic
chr22:29689178(+) A-I      intronic
chr22:29689273(+) A-I      intronic
chr22:29689276(+) A-I      intronic
chr22:29689615(+) A-I      intronic
chr22:29689618(+) A-I      intronic
chr22:29689683(+) A-I      intronic
chr22:29689687(+) A-I      intronic
chr22:29690658(+) A-I      intronic
chr22:29690672(+) A-I      intronic
chr22:29690717(+) A-I      intronic
chr22:29690727(+) A-I      intronic
chr22:29690741(+) A-I      intronic
chr22:29690745(+) A-I      intronic
chr22:29690747(+) A-I      intronic
chr22:29690752(+) A-I      intronic
chr22:29690827(+) A-I      intronic
chr22:29690843(+) A-I      intronic
chr22:29691124(+) A-I      intronic
chr22:29693176(+) A-I      intronic
chr22:29693180(+) A-I      intronic
chr22:29693227(+) A-I      intronic
chr22:29693563(+) A-I      intronic
chr22:29693573(+) A-I      intronic
chr22:29693644(+) A-I      intronic
chr22:29674559(+) A-I      intronic
chr22:29674596(+) A-I      intronic
chr22:29674703(+) A-I      intronic
chr22:29674857(+) A-I      intronic
chr22:29674873(+) A-I      intronic
chr22:29674923(+) A-I      intronic
chr22:29674934(+) A-I      intronic
chr22:29676150(+) A-I      intronic
chr22:29676186(+) A-I      intronic
chr22:29676196(+) A-I      intronic
chr22:29676247(+) A-I      intronic
chr22:29676254(+) A-I      intronic
chr22:29676981(+) A-I      intronic
chr22:29676994(+) A-I      intronic
chr22:29677010(+) A-I      intronic
chr22:29677773(+) A-I      intronic
chr22:29681907(+) A-I      intronic
chr22:29681963(+) A-I      intronic
chr22:29682064(+) A-I      intronic
chr22:29682089(+) A-I      intronic
chr22:29682555(+) A-I      intronic
chr22:29690694(+) A-I      intronic
chr22:29688919(+) A-I      intronic
chr22:29682280(+) A-I      intronic
chr22:29682120(+) A-I      intronic
chr22:29676998(+) A-I      intronic
chr22:29674904(+) A-I      intronic
chr22:29693606(+) A-I      intronic
chr22:29682423(+) A-I      intronic
chr22:29690725(+) A-I      intronic
chr22:29677318(+) A-I      intronic
chr22:29681296(+) A-I      intronic
chr22:29689715(+) A-I      intronic
chr22:29692918(+) A-I      intronic
chr22:29683902(+) A-I      intronic
chr22:29689997(+) A-I      intronic
chr22:29690448(+) A-I      intronic
chr22:29674863(+) A-I      intronic
chr22:29690782(+) A-I      intronic
chr22:29689628(+) A-I      intronic
chr22:29693221(+) A-I      intronic
chr22:29674613(+) A-I      intronic
chr22:29683471(+) A-I      intronic
chr22:29682035(+) A-I      intronic
chr22:29692916(+) A-I      intronic
chr22:29682596(+) A-I      intronic
chr22:29682597(+) A-I      intronic
chr22:29683331(+) A-I      intronic
chr22:29683940(+) A-I      intronic
chr22:29689160(+) A-I      intronic
chr22:29682549(+) A-I      intronic
chr22:29689127(+) A-I      intronic
chr22:29693258(+) A-I      intronic
chr22:29682209(+) A-I      intronic
chr22:29677187(+) A-I      intronic
chr22:29682489(+) A-I      intronic
chr22:29674905(+) A-I      intronic
chr22:29676792(+) A-I      intronic
chr22:29674837(+) A-I      intronic
chr22:29692975(+) A-I      intronic
chr22:29690114(+) A-I      intronic
chr22:29674466(+) A-I      intronic
chr22:29683886(+) A-I      intronic
chr22:29674941(+) A-I      intronic
chr22:29693027(+) A-I      intronic
chr22:29674899(+) A-I      intronic
chr22:29690847(+) A-I      intronic
chr22:29690772(+) A-I      intronic
chr22:29682194(+) A-I      intronic
chr22:29688960(+) A-I      intronic
chr22:29676711(+) A-I      intronic
chr22:29693241(+) A-I      intronic
chr22:29676802(+) A-I      intronic
chr22:29676727(+) A-I      intronic
chr22:29694218(+) A-I      intronic
chr22:29676986(+) A-I      intronic
chr22:29676202(+) A-I      intronic
chr22:29674966(+) A-I      intronic
chr22:29682490(+) A-I      intronic
chr22:29694431(+) A-I      intronic
chr22:29689819(+) A-I      intronic
chr22:29681966(+) A-I      intronic
chr22:29693537(+) A-I      intronic
chr22:29674421(+) A-I      intronic
chr22:29689720(+) A-I      intronic
chr22:29677836(+) A-I      intronic
chr22:29677084(+) A-I      intronic
chr22:29689654(+) A-I      intronic
chr22:29690883(+) A-I      intronic
chr22:29677265(+) A-I      intronic
chr22:29693534(+) A-I      intronic
chr22:29689633(+) A-I      intronic
chr22:29688923(+) A-I      intronic
chr22:29691458(+) A-I      intronic
chr22:29691375(+) A-I      intronic
chr22:29689999(+) A-I      intronic
chr22:29689282(+) A-I      intronic
chr22:29682529(+) A-I      intronic
chr22:29683953(+) A-I      intronic
chr22:29674864(+) A-I      intronic
chr22:29693545(+) A-I      intronic
chr22:29689251(+) A-I      intronic
chr22:29682199(+) A-I      intronic
chr22:29690888(+) A-I      intronic
chr22:29690649(+) A-I      intronic
chr22:29691074(+) A-I      intronic
chr22:29692959(+) A-I      intronic
chr22:29681956(+) A-I      intronic
chr22:29691129(+) A-I      intronic
chr22:29681968(+) A-I      intronic
chr22:29693270(+) A-I      intronic
chr22:29689097(+) A-I      intronic
chr22:29693158(+) A-I      intronic
chr22:29690889(+) A-I      intronic
chr22:29682422(+) A-I      intronic
chr22:29682090(+) A-I      intronic
chr22:29688875(+) A-I      intronic
chr22:29690452(+) A-I      intronic
chr22:29682097(+) A-I      intronic
chr22:29691353(+) A-I      intronic
chr22:29683933(+) A-I      intronic
chr22:29683932(+) A-I      intronic
chr22:29682102(+) A-I      intronic
chr22:29689818(+) A-I      intronic
chr22:29676962(+) A-I      intronic
chr22:29683358(+) A-I      intronic
chr22:29689719(+) A-I      intronic
chr22:29690327(+) A-I      intronic
chr22:29689987(+) A-I      intronic
chr22:29689810(+) A-I      intronic
chr22:29682221(+) A-I      intronic
chr22:29683984(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED EWSR1
chr22:29683886(+) A-I intron -    21960545
chr22:29674613(+) A-G intron -    22484847
chr22:29682489(+) A-G intron -    22484847
chr22:29682493(+) A-G intron -    22484847
chr22:29683886(+) A-G intron -    22484847
chr22:29694496(+) C-A intron -    22484847
chr22:29694497(+) C-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EWSR1
chr22:29665612-29665613(+) m6A exon//intron       24981863
chr22:29665647-29665648(+) m6A exon//intron       24981863
chr22:29668411-29668412(+) m6A CDS//exon       24981863//22575960
chr22:29669753-29669754(+) m6A CDS//exon//intron       22575960
chr22:29669761-29669762(+) m6A CDS//exon//intron       22575960
chr22:29669795-29669796(+) m6A CDS//exon//intron       22575960
chr22:29669816-29669817(+) m6A CDS//exon//intron       22575960
chr22:29669839-29669840(+) m6A CDS//exon//intron       22575960
chr22:29678392-29678393(+) m6A CDS//exon//intron       22575960
chr22:29678406-29678407(+) m6A CDS//exon//intron       22575960
chr22:29678462-29678463(+) m6A CDS//exon//intron       27773535//22575960
chr22:29682964-29682965(+) m6A CDS//exon       24209618//27773535
chr22:29682992-29682993(+) m6A CDS//exon       24209618//27773535
chr22:29683059-29683060(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29684609-29684610(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960
chr22:29684661-29684662(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960
chr22:29684672-29684673(+) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960
chr22:29684785-29684786(+) m6A exon//intron       24284625//24209618//24981863//27773535
chr22:29684844-29684845(+) m6A exon//intron       24284625//24209618//24981863//27773535
chr22:29684852-29684853(+) m6A exon//intron       24284625//24209618//24981863//27773535
chr22:29684883-29684884(+) m6A exon//intron       24209618//27773535
chr22:29687649-29687650(+) m6A exon//intron       24209618
chr22:29687705-29687706(+) m6A exon//intron       24209618//27773535
chr22:29688126-29688127(+) m6A CDS//exon//intron       24209618//24981863//27773535
chr22:29688141-29688142(+) m6A CDS//exon//intron       24209618//24981863//27773535
chr22:29688500-29688501(+) m6A CDS//exon       24209618//24981863//27773535
chr22:29688566-29688567(+) m6A CDS//exon       24209618//24981863//27773535
chr22:29694750-29694751(+) m6A CDS//exon       22575960
chr22:29694807-29694808(+) m6A CDS//exon       22575960
chr22:29694827-29694828(+) m6A CDS//exon       22575960
chr22:29695234-29695235(+) m6A CDS//exon       24209618
chr22:29695240-29695241(+) m6A CDS//exon       24209618
chr22:29695254-29695255(+) m6A CDS//exon       24209618
chr22:29695366-29695367(+) m6A exon//intron       24209618
chr22:29695395-29695396(+) m6A exon//intron       24209618
chr22:29695693-29695694(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29695726-29695727(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29695778-29695779(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29695781-29695782(+) Y CDS//exon       26075521
chr22:29695790-29695791(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29695805-29695806(+) m1A CDS//exon       26863196//26863410
chr22:29695823-29695824(+) m6A CDS//exon       24209618//24981863//27773535//22575960
chr22:29695834-29695835(+) Tm CDS//exon       -
chr22:29696159-29696160(+) m6A 3'UTR//exon       24209618//27773535
chr22:29696199-29696200(+) m6A 3'UTR//exon       24209618//27773535
chr22:29696303-29696304(+) m6A 3'UTR//exon       27773535
chr22:29696311-29696312(+) m6A 3'UTR//exon       27773535
chr22:29696374-29696375(+) m6A 3'UTR//exon       27773535
chr22:29696389-29696390(+) m6A 3'UTR//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EWSR1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Membrane HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: EWSR1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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