Detail Information

Basic Information:


  VIRBase ID:  

VHID00010580

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 CD27
miRBase
Accession/Entrez ID		 zikv-mir-2 939
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - S152//S152. LPFS2//T14//TNFRSF7//Tp55

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CD27
chr12:6558248(+) A-I      intronic
chr12:6558288(+) A-I      intronic
chr12:6558291(+) A-I      intronic
chr12:6558185(+) A-I      intronic
chr12:6558217(+) A-I      intronic
chr12:6558274(+) A-I      intronic
chr12:6558312(+) A-I      intronic
chr12:6558262(+) A-I      intronic
chr12:6558220(+) A-I      intronic
chr12:6557896(+) A-I      intronic
chr12:6555813(+) A-I      intronic
chr12:6555769(+) A-I      intronic
chr12:6555855(+) A-I      intronic
chr12:6557837(+) A-I      intronic
chr12:6555871(+) A-I      intronic
chr12:6555770(+) A-I      intronic
chr12:6557823(+) A-I      intronic
chr12:6557918(+) A-I      intronic
chr12:6558922(+) A-I      intronic
chr12:6558927(+) A-I      intronic
chr12:6555931(+) A-I      intronic
chr12:6558937(+) A-I      intronic
chr12:6557720(+) A-I      intronic
chr12:6558948(+) A-I      intronic
chr12:6558958(+) A-I      intronic
chr12:6558965(+) A-I      intronic
chr12:6557746(+) A-I      intronic
chr12:6558966(+) A-I      intronic
chr12:6558971(+) A-I      intronic
chr12:6558231(+) A-I      intronic
chr12:6558193(+) A-I      intronic
chr12:6558324(+) A-I      intronic
chr12:6556162(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CD27
chr12:6558240(+) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CD27
chr12:6554177-6554178(+) m6A 5'UTR       27371828
chr12:6554258-6554259(+) m6A 5'UTR       27371828
chr12:6560632-6560633(+) m6A 3'UTR//exon       24209618
chr12:6560710-6560711(+) m6A 3'UTR//exon       24209618//26404942
chr12:6560726-6560727(+) m6A 3'UTR//exon       24209618//26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CD27
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: CD27

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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