Detail Information

Basic Information:


  VIRBase ID:  

VHID00010545

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 CAT
miRBase
Accession/Entrez ID		 zikv-mir-2 847
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CAT
chr11:34466803(+) A-I      intronic
chr11:34466977(+) A-I      intronic
chr11:34466984(+) A-I      intronic
chr11:34466782(+) A-I      intronic
chr11:34466936(+) A-I      intronic
chr11:34490338(+) A-I      intronic
chr11:34466920(+) A-I      intronic
chr11:34490388(+) A-I      intronic
chr11:34466804(+) A-I      intronic
chr11:34466781(+) A-I      intronic
chr11:34466982(+) A-I      intronic
chr11:34468418(+) A-I      intronic
chr11:34462210(+) A-I      intronic
chr11:34464027(+) A-I      intronic
chr11:34490344(+) A-I      intronic
chr11:34490368(+) A-I      intronic
chr11:34491418(+) A-I      intronic
chr11:34466773(+) A-I      intronic
chr11:34463238(+) A-I      intronic
chr11:34490412(+) A-I      intronic
chr11:34463261(+) A-I      intronic
chr11:34466926(+) A-I      intronic
chr11:34479029(+) A-I      intronic
chr11:34490387(+) A-I      intronic
chr11:34466929(+) A-I      intronic
chr11:34491231(+) A-I      intronic
chr11:34466806(+) A-I      intronic
chr11:34466919(+) A-I      intronic
chr11:34491232(+) A-I      intronic
chr11:34462214(+) A-I      intronic
chr11:34462384(+) A-I      intronic
chr11:34466859(+) A-I      intronic
chr11:34463084(+) A-I      intronic
chr11:34490352(+) A-I      intronic
chr11:34462213(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CAT
chr11:34460510-34460511(+) m6A 5'UTR       24284625//24981863
chr11:34460550-34460551(+) m6A 5'UTR       24981863
chr11:34478297-34478298(+) m6A CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CAT
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: CAT

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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