Detail Information

Basic Information:


  VIRBase ID:  

VHID00010473

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-2 BYSL
miRBase
Accession/Entrez ID		 zikv-mir-2 705
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - BYSTIN//Enp1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BYSL
chr6:41893121(+) A-I      intronic
chr6:41896902(+) A-I      intronic
chr6:41897207(+) A-I      intronic
chr6:41896711(+) A-I      intronic
chr6:41896983(+) A-I      intronic
chr6:41897125(+) A-I      intronic
chr6:41896905(+) A-I      intronic
chr6:41897060(+) A-I      intronic
chr6:41897050(+) A-I      intronic
chr6:41897215(+) A-I      intronic
chr6:41897084(+) A-I      intronic
chr6:41896991(+) A-I      intronic
chr6:41897065(+) A-I      intronic
chr6:41897102(+) A-I      intronic
chr6:41896917(+) A-I      intronic
chr6:41896757(+) A-I      intronic
chr6:41894711(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BYSL
chr6:41896608(+) A-I intron -    15342557
chr6:41896711(+) A-I intron -    15342557
chr6:41896829(+) A-I intron -    15342557
chr6:41896917(+) A-I intron -    15342557
chr6:41896983(+) A-I intron -    15342557
chr6:41896985(+) A-I intron -    15342557
chr6:41897060(+) A-I intron -    15342557
chr6:41897215(+) A-I intron -    15342557
chr6:41896608(+) A-G intron -    22484847
chr6:41896757(+) A-G intron -    22484847
chr6:41896914(+) A-G intron -    22484847
chr6:41896917(+) A-G intron -    22484847
chr6:41896985(+) A-G intron -    22484847
chr6:41896991(+) A-G intron -    22484847
chr6:41897065(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BYSL
chr6:41888996-41888997(+) m6A 5'UTR       24981863//22608085
chr6:41889060-41889061(+) m6A 5'UTR       24981863//22608085
chr6:41889123-41889124(+) m6A 5'UTR       24981863
chr6:41889344-41889345(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960
chr6:41889423-41889424(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960
chr6:41889503-41889504(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960
chr6:41889522-41889523(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960
chr6:41889529-41889530(+) m6A CDS//exon       24284625//24209618//24981863//22575960
chr6:41895219-41895220(+) m6A CDS//exon       24209618//24981863//26404942
chr6:41895255-41895256(+) m6A CDS//exon       24209618//24981863
chr6:41895261-41895262(+) m6A CDS//exon       24209618//24981863
chr6:41900234-41900235(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr6:41900248-41900249(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr6:41900316-41900317(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr6:41900338-41900339(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr6:41900449-41900450(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900484-41900485(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900492-41900493(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900538-41900539(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900569-41900570(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900592-41900593(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900601-41900602(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr6:41900768-41900769(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BYSL
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-2
Interactor2: BYSL

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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