Detail Information

Basic Information:


  VIRBase ID:  

VHID00009375

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 TMPRSS9
miRBase
Accession/Entrez ID		 zikv-mir-1 360200
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TMPRSS9
chr19:2414869(+) A-I      intronic
chr19:2414498(+) A-I      intronic
chr19:2415043(+) A-I      intronic
chr19:2415042(+) A-I      intronic
chr19:2414499(+) A-I      intronic
chr19:2414497(+) A-I      intronic
chr19:2414438(+) A-I      intronic
chr19:2414421(+) A-I      intronic
chr19:2414337(+) A-I      intronic
chr19:2400892(+) A-I      intronic
chr19:2415082(+) A-I      intronic
chr19:2414786(+) A-I      intronic
chr19:2392001(+) A-I      intronic
chr19:2415072(+) A-I      intronic
chr19:2400330(+) A-I      intronic
chr19:2416241(+) A-I      intronic
chr19:2411325(+) A-I      intronic
chr19:2415216(+) A-I      intronic
chr19:2420104(+) A-I      intronic
chr19:2398495(+) A-I      intronic
chr19:2395352(+) A-I      intronic
chr19:2414864(+) A-I      intronic
chr19:2414886(+) A-I      intronic
chr19:2414460(+) A-I      intronic
chr19:2412210(+) A-I      intronic
chr19:2416162(+) A-I      intronic
chr19:2417655(+) A-I      intronic
chr19:2416157(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TMPRSS9
chr19:2419270(+) T-C intron -    22484847
chr19:2419298(+) T-C intron -    22484847
chr19:2419299(+) T-C intron -    22484847
chr19:2419653(+) T-C intron -    22484847
chr19:2419688(+) T-C intron -    22484847
chr19:2420078(+) T-C intron -    22484847
chr19:2420265(+) T-C intron -    22484847
chr19:2420271(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMPRSS9
chr19:2425007-2425008(+) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TMPRSS9
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: TMPRSS9

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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