Detail Information

Basic Information:


  VIRBase ID:  

VHID00009299

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 SYT10
miRBase
Accession/Entrez ID		 zikv-mir-1 341359
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SYT10
chr12:33587509(-) A-I      intronic
chr12:33553798(-) A-I      intronic
chr12:33556244(-) A-I      intronic
chr12:33587495(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SYT10
chr12:33553798(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SYT10
chr12:33560062-33560063(-) m6A 3'UTR//CDS       25456834
chr12:33560098-33560099(-) m6A 3'UTR//CDS       25456834
chr12:33560155-33560156(-) m6A 3'UTR//CDS       25456834
chr12:33560164-33560165(-) m6A 3'UTR//CDS       25456834
chr12:33560196-33560197(-) m6A 3'UTR//CDS       25456834
chr12:33560218-33560219(-) m6A 3'UTR//CDS       25456834
chr12:33592335-33592336(-) m6A CDS       25456834
chr12:33592428-33592429(-) m6A CDS       25456834
chr12:33592550-33592551(-) m6A 5'UTR       25456834
chr12:33592687-33592688(-) m6A 5'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SYT10
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: SYT10

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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