Detail Information

Basic Information:


  VIRBase ID:  

VHID00006959

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 CAAP1
miRBase
Accession/Entrez ID		 zikv-mir-1 79886
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - C9orf82//CAAP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CAAP1
chr9:26846888(-) A-I      intronic
chr9:26865462(-) A-I      intronic
chr9:26865439(-) A-I      intronic
chr9:26865373(-) A-I      intronic
chr9:26860708(-) A-I      intronic
chr9:26852370(-) A-I      intronic
chr9:26852092(-) A-I      intronic
chr9:26850039(-) A-I      intronic
chr9:26849965(-) A-I      intronic
chr9:26848467(-) A-I      intronic
chr9:26848322(-) A-I      intronic
chr9:26847449(-) A-I      intronic
chr9:26847446(-) A-I      intronic
chr9:26847441(-) A-I      intronic
chr9:26847436(-) A-I      intronic
chr9:26847418(-) A-I      intronic
chr9:26847417(-) A-I      intronic
chr9:26847415(-) A-I      intronic
chr9:26847409(-) A-I      intronic
chr9:26847408(-) A-I      intronic
chr9:26847321(-) A-I      intronic
chr9:26847318(-) A-I      intronic
chr9:26847310(-) A-I      intronic
chr9:26846889(-) A-I      intronic
chr9:26870819(-) A-I      intronic
chr9:26870808(-) A-I      intronic
chr9:26870803(-) A-I      intronic
chr9:26870794(-) A-I      intronic
chr9:26870784(-) A-I      intronic
chr9:26870782(-) A-I      intronic
chr9:26850133(-) A-I      intronic
chr9:26850145(-) A-I      intronic
chr9:26870730(-) A-I      intronic
chr9:26864035(-) A-I      intronic
chr9:26864034(-) A-I      intronic
chr9:26864029(-) A-I      intronic
chr9:26864004(-) A-I      intronic
chr9:26850107(-) A-I      intronic
chr9:26850106(-) A-I      intronic
chr9:26846752(-) A-I      intronic
chr9:26846746(-) A-I      intronic
chr9:26845587(-) A-I      intronic
chr9:26845581(-) A-I      intronic
chr9:26844279(-) A-I      intronic
chr9:26875217(-) A-I      intronic
chr9:26874154(-) A-I      intronic
chr9:26874118(-) A-I      intronic
chr9:26871410(-) A-I      intronic
chr9:26870842(-) A-I      intronic
chr9:26870818(-) A-I      intronic
chr9:26865982(-) A-I      intronic
chr9:26866009(-) A-I      intronic
chr9:26865921(-) A-I      intronic
chr9:26865899(-) A-I      intronic
chr9:26870783(-) A-I      intronic
chr9:26870726(-) A-I      intronic
chr9:26870717(-) A-I      intronic
chr9:26870649(-) A-I      intronic
chr9:26866126(-) A-I      intronic
chr9:26866027(-) A-I      intronic
chr9:26880875(-) A-I      intronic
chr9:26875308(-) A-I      intronic
chr9:26865483(-) A-I      intronic
chr9:26875301(-) A-I      intronic
chr9:26875289(-) A-I      intronic
chr9:26865941(-) A-I      intronic
chr9:26885243(-) A-I      intronic
chr9:26844243(-) A-I      intronic
chr9:26865365(-) A-I      intronic
chr9:26871492(-) A-I      intronic
chr9:26870864(-) A-I      intronic
chr9:26875378(-) A-I      intronic
chr9:26848254(-) A-I      intronic
chr9:26875262(-) A-I      intronic
chr9:26860626(-) A-I      intronic
chr9:26875275(-) A-I      intronic
chr9:26866008(-) A-I      intronic
chr9:26845551(-) A-I      intronic
chr9:26873041(-) A-I      intronic
chr9:26870650(-) A-I      intronic
chr9:26850031(-) A-I      intronic
chr9:26880838(-) A-I      intronic
chr9:26865453(-) A-I      intronic
chr9:26870874(-) A-I      intronic
chr9:26865317(-) A-I      intronic
chr9:26856071(-) A-I      intronic
chr9:26870755(-) A-I      intronic
chr9:26845567(-) A-I      intronic
chr9:26870823(-) A-I      intronic
chr9:26847351(-) A-I      intronic
chr9:26847377(-) A-I      intronic
chr9:26865306(-) A-I      intronic
chr9:26850100(-) A-I      intronic
chr9:26845651(-) A-I      intronic
chr9:26848267(-) A-I      intronic
chr9:26845549(-) A-I      intronic
chr9:26846751(-) A-I      intronic
chr9:26871325(-) A-I      intronic
chr9:26873962(-) A-I      intronic
chr9:26871829(-) A-I      intronic
chr9:26880872(-) A-I      intronic
chr9:26885268(-) A-I      intronic
chr9:26846252(-) A-I      intronic
chr9:26865953(-) A-I      intronic
chr9:26873014(-) A-I      intronic
chr9:26870887(-) A-I      intronic
chr9:26848293(-) A-I      intronic
chr9:26870743(-) A-I      intronic
chr9:26871426(-) A-I      intronic
chr9:26875332(-) A-I      intronic
chr9:26875227(-) A-I      intronic
chr9:26890831(-) A-I      intronic
chr9:26845553(-) A-I      intronic
chr9:26870700(-) A-I      intronic
chr9:26875220(-) A-I      intronic
chr9:26887053(-) A-I      intronic
chr9:26870641(-) A-I      intronic
chr9:26865409(-) A-I      intronic
chr9:26849969(-) A-I      intronic
chr9:26878692(-) A-I      intronic
chr9:26880853(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CAAP1
chr9:26845538(-) A-G intron -    22484847
chr9:26845567(-) A-G intron -    22484847
chr9:26850100(-) A-G intron -    22484847
chr9:26870753(-) A-G intron -    22484847
chr9:26870755(-) A-G intron -    22484847
chr9:26880853(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CAAP1
chr9:26842261-26842262(-) m6A 3'UTR       27773535
chr9:26842360-26842361(-) Gm 3'UTR//CDS       -
chr9:26842364-26842365(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr9:26842439-26842440(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr9:26842463-26842464(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr9:26842494-26842495(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr9:26861067-26861068(-) m6A 3'UTR//CDS//intron       24209618//24981863//27773535//22608085
chr9:26861131-26861132(-) m6A 3'UTR//CDS//exon//intron       24209618//27773535
chr9:26892633-26892634(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr9:26892743-26892744(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr9:26892750-26892751(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CAAP1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: CAAP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...