Detail Information

Basic Information:


  VIRBase ID:  

VHID00006789

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 CRELD2
miRBase
Accession/Entrez ID		 zikv-mir-1 79174
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CRELD2
chr22:50313447(+) A-I      Syn:Leu->Leu
chr22:50313458(+) A-I      NonSyn:Glu->Gly
chr22:50313500(+) A-I      intronic
chr22:50313501(+) A-I      intronic
chr22:50313513(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CRELD2
chr22:50317044(+) C-T intron -    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CRELD2
chr22:50311984-50311985(+) m6A 5'UTR       24981863
chr22:50311989-50311990(+) m6A 5'UTR       24981863
chr22:50312062-50312063(+) m6A 5'UTR       24981863
chr22:50312315-50312316(+) m6A 5'UTR//intron       24209618//24981863
chr22:50312376-50312377(+) m6A 5'UTR//intron       24209618//24981863
chr22:50312532-50312533(+) m6A CDS//exon       24209618//25456834//22575960
chr22:50312887-50312888(+) m6A CDS//exon       24209618//25456834//22575960
chr22:50312902-50312903(+) m6A CDS//exon       24209618//25456834//22575960
chr22:50312917-50312918(+) m6A CDS//exon       24209618//25456834//22575960
chr22:50315390-50315391(+) m6A CDS//exon       -
chr22:50315949-50315950(+) m6A CDS//intron       24284625
chr22:50316304-50316305(+) m6A CDS//exon       25456834
chr22:50317155-50317156(+) m6A exon//intron       24284625
chr22:50317165-50317166(+) m6A exon//intron       24284625
chr22:50317173-50317174(+) m6A exon//intron       24284625
chr22:50317623-50317624(+) m6A exon//intron       24284625//27371828
chr22:50317709-50317710(+) m6A exon//intron       24284625
chr22:50317861-50317862(+) m6A exon//intron       24284625
chr22:50317867-50317868(+) m6A exon//intron       24284625
chr22:50317908-50317909(+) m6A exon//intron       24284625
chr22:50318265-50318266(+) m6A exon//intron       24284625
chr22:50319093-50319094(+) m6A CDS//exon       22575960
chr22:50319115-50319116(+) m6A CDS//exon       22575960
chr22:50319268-50319269(+) m6A exon//intron       -
chr22:50319827-50319828(+) m6A exon//intron       24284625
chr22:50319846-50319847(+) m6A exon//intron       24284625
chr22:50319891-50319892(+) m6A exon//intron       24284625
chr22:50319904-50319905(+) m6A exon//intron       24284625
chr22:50321120-50321121(+) m6A 3'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CRELD2
Chromatin K562 cells     -
Exosome Blood     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: CRELD2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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