Detail Information

Basic Information:


  VIRBase ID:  

VHID00006228

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 NHSL1
miRBase
Accession/Entrez ID		 zikv-mir-1 57224
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - C6orf63

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NHSL1
chr6:138767271(-) A-I      intronic
chr6:138767280(-) A-I      intronic
chr6:138767286(-) A-I      intronic
chr6:138767313(-) A-I      intronic
chr6:138764837(-) A-I      intronic
chr6:138788038(-) A-I      intronic
chr6:138811881(-) A-I      intronic
chr6:138852797(-) A-I      intronic
chr6:138835392(-) A-I      intronic
chr6:138868721(-) A-I      intronic
chr6:138799297(-) A-I      intronic
chr6:138888498(-) A-I      intronic
chr6:138888438(-) A-I      intronic
chr6:138888405(-) A-I      intronic
chr6:138779900(-) A-I      intronic
chr6:138778304(-) A-I      intronic
chr6:138778290(-) A-I      intronic
chr6:138770579(-) A-I      intronic
chr6:138767453(-) A-I      intronic
chr6:138767368(-) A-I      intronic
chr6:138767307(-) A-I      intronic
chr6:138767233(-) A-I      intronic
chr6:138888403(-) A-I      intronic
chr6:138836054(-) A-I      intronic
chr6:138879945(-) A-I      intronic
chr6:138887054(-) A-I      intronic
chr6:138887411(-) A-I      intronic
chr6:138879936(-) A-I      intronic
chr6:138879935(-) A-I      intronic
chr6:138767369(-) A-I      intronic
chr6:138764867(-) A-I      intronic
chr6:138796500(-) A-I      intronic
chr6:138796498(-) A-I      intronic
chr6:138843616(-) A-I      intronic
chr6:138843478(-) A-I      intronic
chr6:138793243(-) A-I      intronic
chr6:138787442(-) A-I      intronic
chr6:138787064(-) A-I      intronic
chr6:138867498(-) A-I      intronic
chr6:138764858(-) A-I      intronic
chr6:138867483(-) A-I      intronic
chr6:138852801(-) A-I      intronic
chr6:138852785(-) A-I      intronic
chr6:138852781(-) A-I      intronic
chr6:138852775(-) A-I      intronic
chr6:138764728(-) A-I      intronic
chr6:138779098(-) A-I      intronic
chr6:138787062(-) A-I      intronic
chr6:138746175(-) A-I      intronic
chr6:138780262(-) A-I      intronic
chr6:138764747(-) A-I      intronic
chr6:138887423(-) A-I      intronic
chr6:138764734(-) A-I      intronic
chr6:138748477(-) A-I      intronic
chr6:138748414(-) A-I      intronic
chr6:138746303(-) A-I      intronic
chr6:138746137(-) A-I      intronic
chr6:138787057(-) A-I      intronic
chr6:138787054(-) A-I      intronic
chr6:138778953(-) A-I      intronic
chr6:138746149(-) A-I      intronic
chr6:138790762(-) A-I      intronic
chr6:138793053(-) A-I      intronic
chr6:138844544(-) A-I      intronic
chr6:138787298(-) A-I      intronic
chr6:138856521(-) A-I      intronic
chr6:138793236(-) A-I      intronic
chr6:138767446(-) A-I      intronic
chr6:138798654(-) A-I      intronic
chr6:138793059(-) A-I      intronic
chr6:138841565(-) A-I      intronic
chr6:138764807(-) A-I      intronic
chr6:138880123(-) A-I      intronic
chr6:138847454(-) A-I      intronic
chr6:138764855(-) A-I      intronic
chr6:138880104(-) A-I      intronic
chr6:138841708(-) A-I      intronic
chr6:138796640(-) A-I      intronic
chr6:138799272(-) A-I      intronic
chr6:138888484(-) A-I      intronic
chr6:138748465(-) A-I      intronic
chr6:138852854(-) A-I      intronic
chr6:138748397(-) A-I      intronic
chr6:138769933(-) A-I      intronic
chr6:138870264(-) A-I      intronic
chr6:138880008(-) A-I      intronic
chr6:138787273(-) A-I      intronic
chr6:138779948(-) A-I      intronic
chr6:138883715(-) A-I      intronic
chr6:138790610(-) A-I      intronic
chr6:138793532(-) A-I      intronic
chr6:138764872(-) A-I      intronic
chr6:138789143(-) A-I      intronic
chr6:138748501(-) A-I      intronic
chr6:138836056(-) A-I      intronic
chr6:138746366(-) A-I      intronic
chr6:138888485(-) A-I      intronic
chr6:138746357(-) A-I      intronic
chr6:138746194(-) A-I      intronic
chr6:138879842(-) A-I      intronic
chr6:138778156(-) A-I      intronic
chr6:138748468(-) A-I      intronic
chr6:138788110(-) A-I      intronic
chr6:138852858(-) A-I      intronic
chr6:138787315(-) A-I      intronic
chr6:138841716(-) A-I      intronic
chr6:138887017(-) A-I      intronic
chr6:138764845(-) A-I      intronic
chr6:138837834(-) A-I      intronic
chr6:138846658(-) A-I      intronic
chr6:138767312(-) A-I      intronic
chr6:138748455(-) A-I      intronic
chr6:138799315(-) A-I      intronic
chr6:138746529(-) A-I      intronic
chr6:138746430(-) A-I      intronic
chr6:138746515(-) A-I      intronic
chr6:138764891(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NHSL1
chr6:138888362(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NHSL1
chr6:138743194-138743195(-) m6A 3'UTR       27773535
chr6:138743258-138743259(-) m6A 3'UTR       27773535
chr6:138743319-138743320(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743344-138743345(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743451-138743452(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743481-138743482(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743486-138743487(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743528-138743529(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743566-138743567(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743572-138743573(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743580-138743581(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743605-138743606(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743700-138743701(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138743729-138743730(-) m6A 3'UTR       27773535//22608085
chr6:138743750-138743751(-) m6A 3'UTR       27773535
chr6:138743830-138743831(-) m6A 3'UTR       27773535
chr6:138743837-138743838(-) m6A 3'UTR       27773535
chr6:138744006-138744007(-) m6A 3'UTR       27773535
chr6:138744109-138744110(-) m6A 3'UTR       27773535
chr6:138744217-138744218(-) m6A 3'UTR       27773535
chr6:138744282-138744283(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138744296-138744297(-) m6A 3'UTR       24981863//27773535//22608085
chr6:138744397-138744398(-) m6A 3'UTR       24981863//27773535
chr6:138744579-138744580(-) m6A 3'UTR       27773535
chr6:138744696-138744697(-) m6A 3'UTR       27773535
chr6:138745282-138745283(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22575960//22608085
chr6:138745376-138745377(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085
chr6:138745428-138745429(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22575960//22608085
chr6:138745494-138745495(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr6:138745623-138745624(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr6:138745701-138745702(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138745707-138745708(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138745746-138745747(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138745899-138745900(-) m6A CDS       24284625//24981863//27773535
chr6:138750868-138750869(-) m6A CDS       24284625//27773535
chr6:138750878-138750879(-) m6A CDS       24284625//27773535
chr6:138750965-138750966(-) m6A CDS       27773535//27773536
chr6:138751585-138751586(-) m6A CDS       27773535//27773536
chr6:138751881-138751882(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr6:138751927-138751928(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr6:138752177-138752178(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr6:138752184-138752185(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr6:138752195-138752196(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr6:138752230-138752231(-) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr6:138752303-138752304(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138752383-138752384(-) m6A CDS       24284625//27773535
chr6:138752424-138752425(-) m6A CDS       24284625//24981863//27773535
chr6:138752647-138752648(-) m6A CDS       24284625//27773535
chr6:138752726-138752727(-) m1A CDS       26863410
chr6:138752982-138752983(-) m6A CDS       27773535
chr6:138753097-138753098(-) m6A CDS       24284625//24981863//27773535
chr6:138753148-138753149(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753449-138753450(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753496-138753497(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753532-138753533(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753541-138753542(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753589-138753590(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753633-138753634(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr6:138753673-138753674(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138753718-138753719(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138753916-138753917(-) m6A CDS       24284625//24981863//27773535//22608085
chr6:138754011-138754012(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754030-138754031(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754036-138754037(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754126-138754127(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754179-138754180(-) m6A CDS       24284625//24981863//27773535//22608085
chr6:138754317-138754318(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754338-138754339(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754349-138754350(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754355-138754356(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754384-138754385(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754435-138754436(-) m6A CDS       24284625//25456834//24981863//27773535//22608085
chr6:138754483-138754484(-) m6A CDS       24284625//25456834//27773535//22608085
chr6:138754699-138754700(-) m6A CDS       27773535//22608085
chr6:138754706-138754707(-) m6A CDS       27773535//22608085
chr6:138763158-138763159(-) m6A CDS//intron       24284625//27773535
chr6:138763199-138763200(-) m6A CDS//intron       27773535
chr6:138767937-138767938(-) m6A exon//intron       27773535
chr6:138767987-138767988(-) m6A exon//intron       27773535
chr6:138768118-138768119(-) m6A exon//intron       27773535
chr6:138768173-138768174(-) m6A CDS//exon       27773535
chr6:138768227-138768228(-) m6A CDS//exon       27773535
chr6:138768232-138768233(-) m6A CDS//exon       27773535
chr6:138768275-138768276(-) m6A CDS//exon       27773535
chr6:138768282-138768283(-) m6A CDS//exon       27773535
chr6:138794453-138794454(-) m6A CDS//exon       27773535
chr6:138794514-138794515(-) m6A CDS//exon       27773535
chr6:138817399-138817400(-) m6A CDS//exon       27773535
chr6:138817416-138817417(-) m6A CDS//exon       27773535
chr6:138817475-138817476(-) m6A CDS//exon       27773535
chr6:138820385-138820386(-) m6A CDS//exon//intron       27773535
chr6:138893122-138893123(-) m6A 5'UTR//exon//intron       24981863
chr6:138893142-138893143(-) m6A 5'UTR//exon//intron       24981863
chr6:138893560-138893561(-) m6A 5'UTR//exon//intron       24981863
chr6:138893567-138893568(-) m6A 5'UTR//exon//intron       24981863
chr6:139013632-139013633(-) m6A CDS//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NHSL1
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: NHSL1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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