Detail Information

Basic Information:


  VIRBase ID:  

VHID00005484

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 ASNSD1
miRBase
Accession/Entrez ID		 zikv-mir-1 54529
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - NBLA00058//NS3TP1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ASNSD1
chr2:190528083(+) A-I      intronic
chr2:190528097(+) A-I      intronic
chr2:190527575(+) A-I      intronic
chr2:190527683(+) A-I      intronic
chr2:190528044(+) A-I      intronic
chr2:190534820(+) A-I      intronic
chr2:190527576(+) A-I      intronic
chr2:190528080(+) A-I      intronic
chr2:190528213(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ASNSD1
chr2:190526136-190526137(+) m6A 5'UTR       24981863
chr2:190526274-190526275(+) m6A 5'UTR//CDS       24981863//22608085
chr2:190528634-190528635(+) m6A 5'UTR//CDS//intron       24981863//27773535//22608085
chr2:190528655-190528656(+) m6A 5'UTR//CDS//intron       24981863//27773535//22608085
chr2:190530123-190530124(+) m6A 3'UTR//5'UTR//CDS//intron       24981863//27773535//22608085
chr2:190530147-190530148(+) m6A 3'UTR//5'UTR//CDS       24981863//27773535//22608085
chr2:190530152-190530153(+) m6A 3'UTR//5'UTR//CDS       24981863//27773535//22608085
chr2:190530779-190530780(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085
chr2:190530808-190530809(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530814-190530815(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530819-190530820(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530883-190530884(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530922-190530923(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530941-190530942(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530950-190530951(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:190530965-190530966(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22608085
chr2:190531388-190531389(+) m6A CDS//intron       22608085
chr2:190531519-190531520(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085
chr2:190531559-190531560(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085
chr2:190531574-190531575(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085
chr2:190531620-190531621(+) m6A CDS//intron       24284625//24981863//26404942//22608085
chr2:190531898-190531899(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr2:190531941-190531942(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr2:190531976-190531977(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:190532054-190532055(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:190532093-190532094(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:190532102-190532103(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:190532165-190532166(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:190532184-190532185(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:190532599-190532600(+) m6A CDS       24284625//24209618
chr2:190535231-190535232(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr2:190535289-190535290(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr2:190535440-190535441(+) m6A CDS       24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ASNSD1
Chromatin K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: ASNSD1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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