Detail Information

Basic Information:


  VIRBase ID:  

VHID00005475

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 ZDHHC13
miRBase
Accession/Entrez ID		 zikv-mir-1 54503
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - HIP14L//HIP3RP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZDHHC13
chr11:19148327(+) A-I      intronic
chr11:19182238(+) A-I      intronic
chr11:19182221(+) A-I      intronic
chr11:19181275(+) A-I      intronic
chr11:19148451(+) A-I      intronic
chr11:19181269(+) A-I      intronic
chr11:19182344(+) A-I      intronic
chr11:19181261(+) A-I      intronic
chr11:19182338(+) A-I      intronic
chr11:19181255(+) A-I      intronic
chr11:19181215(+) A-I      intronic
chr11:19181175(+) A-I      intronic
chr11:19181238(+) A-I      intronic
chr11:19181224(+) A-I      intronic
chr11:19181223(+) A-I      intronic
chr11:19182301(+) A-I      intronic
chr11:19182294(+) A-I      intronic
chr11:19181161(+) A-I      intronic
chr11:19148380(+) A-I      intronic
chr11:19182292(+) A-I      intronic
chr11:19181288(+) A-I      intronic
chr11:19181282(+) A-I      intronic
chr11:19181240(+) A-I      intronic
chr11:19181239(+) A-I      intronic
chr11:19148266(+) A-I      intronic
chr11:19182395(+) A-I      intronic
chr11:19182339(+) A-I      intronic
chr11:19148249(+) A-I      intronic
chr11:19182276(+) A-I      intronic
chr11:19182336(+) A-I      intronic
chr11:19182335(+) A-I      intronic
chr11:19182300(+) A-I      intronic
chr11:19182290(+) A-I      intronic
chr11:19182282(+) A-I      intronic
chr11:19182257(+) A-I      intronic
chr11:19181268(+) A-I      intronic
chr11:19152695(+) A-I      intronic
chr11:19155765(+) A-I      intronic
chr11:19156472(+) A-I      intronic
chr11:19152693(+) A-I      intronic
chr11:19145061(+) A-I      intronic
chr11:19152446(+) A-I      intronic
chr11:19152459(+) A-I      intronic
chr11:19151452(+) A-I      intronic
chr11:19151462(+) A-I      intronic
chr11:19152630(+) A-I      intronic
chr11:19151520(+) A-I      intronic
chr11:19181195(+) A-I      intronic
chr11:19147984(+) A-I      intronic
chr11:19181160(+) A-I      intronic
chr11:19152767(+) A-I      intronic
chr11:19182264(+) A-I      intronic
chr11:19182220(+) A-I      intronic
chr11:19181318(+) A-I      intronic
chr11:19155861(+) A-I      intronic
chr11:19181345(+) A-I      intronic
chr11:19155833(+) A-I      intronic
chr11:19181194(+) A-I      intronic
chr11:19182402(+) A-I      intronic
chr11:19151384(+) A-I      intronic
chr11:19156468(+) A-I      intronic
chr11:19176975(+) A-I      intronic
chr11:19181201(+) A-I      intronic
chr11:19182235(+) A-I      intronic
chr11:19155781(+) A-I      intronic
chr11:19181199(+) A-I      intronic
chr11:19156440(+) A-I      intronic
chr11:19182381(+) A-I      intronic
chr11:19182281(+) A-I      intronic
chr11:19182239(+) A-I      intronic
chr11:19152769(+) A-I      intronic
chr11:19181264(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZDHHC13
chr11:19181201(+) A-I intron -    22327324
chr11:19181318(+) A-I intron -    21960545
chr11:19181328(+) A-I intron -    21960545
chr11:19181345(+) A-I intron -    21960545
chr11:19182402(+) A-I intron -    21960545
chr11:19181160(+) A-I intron -    21960545
chr11:19181161(+) A-I intron -    21960545
chr11:19178281(+) A-C intron -    22484847
chr11:19181160(+) A-G intron -    22484847
chr11:19181194(+) A-G intron -    22484847
chr11:19181195(+) A-G intron -    22484847
chr11:19181199(+) A-G intron -    22484847
chr11:19181201(+) A-G intron -    22484847
chr11:19182381(+) A-G intron -    22484847
chr11:19182402(+) A-G intron -    22484847
chr11:19186033(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZDHHC13
chr11:19197690-19197691(+) m6A 3'UTR//exon       24981863
chr11:19197713-19197714(+) m6A 3'UTR//exon       24981863
chr11:19197728-19197729(+) m6A 3'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZDHHC13
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: ZDHHC13

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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