Detail Information

Basic Information:


  VIRBase ID:  

VHID00005346

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 ATP6V1H
miRBase
Accession/Entrez ID		 zikv-mir-1 51606
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CGI-11//MSTP042//NBP1//SFD//SFDalpha//SFDbeta//VMA13

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATP6V1H
chr8:54715757(-) A-I      intronic
chr8:54723200(-) A-I      intronic
chr8:54731545(-) A-I      intronic
chr8:54731926(-) A-I      intronic
chr8:54707205(-) A-I      intronic
chr8:54747168(-) A-I      intronic
chr8:54734097(-) A-I      intronic
chr8:54715685(-) A-I      intronic
chr8:54736129(-) A-I      intronic
chr8:54736207(-) A-I      intronic
chr8:54715723(-) A-I      intronic
chr8:54736208(-) A-I      intronic
chr8:54736209(-) A-I      intronic
chr8:54747075(-) A-I      intronic
chr8:54715734(-) A-I      intronic
chr8:54750778(-) A-I      intronic
chr8:54706354(-) A-I      intronic
chr8:54657879(-) A-I      intronic
chr8:54715731(-) A-I      intronic
chr8:54657866(-) A-I      intronic
chr8:54657874(-) A-I      intronic
chr8:54660381(-) A-I      intronic
chr8:54660496(-) A-I      intronic
chr8:54660521(-) A-I      intronic
chr8:54660534(-) A-I      intronic
chr8:54736211(-) A-I      intronic
chr8:54660636(-) A-I      intronic
chr8:54660649(-) A-I      intronic
chr8:54706273(-) A-I      intronic
chr8:54706336(-) A-I      intronic
chr8:54706351(-) A-I      intronic
chr8:54707047(-) A-I      intronic
chr8:54707050(-) A-I      intronic
chr8:54707176(-) A-I      intronic
chr8:54658953(-) A-I      intronic
chr8:54657952(-) A-I      intronic
chr8:54657944(-) A-I      intronic
chr8:54707090(-) A-I      intronic
chr8:54660228(-) A-I      intronic
chr8:54710362(-) A-I      intronic
chr8:54660264(-) A-I      intronic
chr8:54631924(-) A-I      intronic
chr8:54734093(-) A-I      intronic
chr8:54752936(-) A-I      intronic
chr8:54733115(-) A-I      intronic
chr8:54747510(-) A-I      intronic
chr8:54657710(-) A-I      intronic
chr8:54721136(-) A-I      intronic
chr8:54732032(-) A-I      intronic
chr8:54707108(-) A-I      intronic
chr8:54657861(-) A-I      intronic
chr8:54658834(-) A-I      intronic
chr8:54725501(-) A-I      intronic
chr8:54660704(-) A-I      intronic
chr8:54731962(-) A-I      intronic
chr8:54660475(-) A-I      intronic
chr8:54657783(-) A-I      intronic
chr8:54665275(-) A-I      intronic
chr8:54668851(-) A-I      intronic
chr8:54736307(-) A-I      intronic
chr8:54660606(-) A-I      intronic
chr8:54665290(-) A-I      intronic
chr8:54660481(-) A-I      intronic
chr8:54725527(-) A-I      intronic
chr8:54739263(-) A-I      intronic
chr8:54723045(-) A-I      intronic
chr8:54706421(-) A-I      intronic
chr8:54660596(-) A-I      intronic
chr8:54706281(-) A-I      intronic
chr8:54747124(-) A-I      intronic
chr8:54668769(-) A-I      intronic
chr8:54660482(-) A-I      intronic
chr8:54677878(-) A-I      intronic
chr8:54657758(-) A-I      intronic
chr8:54731510(-) A-I      intronic
chr8:54665293(-) A-I      intronic
chr8:54705981(-) A-I      intronic
chr8:54706399(-) A-I      intronic
chr8:54660267(-) A-I      intronic
chr8:54736197(-) A-I      intronic
chr8:54657698(-) A-I      intronic
chr8:54660679(-) A-I      intronic
chr8:54660316(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATP6V1H
chr8:54731962(-) A-I intron -    15545495
chr8:54731980(-) A-I intron -    15545495
chr8:54732032(-) A-I intron -    15545495
chr8:54732189(-) A-I intron -    15545495
chr8:54660596(-) A-G intron -    22484847
chr8:54660606(-) A-G intron -    22484847
chr8:54660655(-) A-G intron -    22484847
chr8:54660679(-) A-G intron -    22484847
chr8:54660704(-) A-G intron -    22484847
chr8:54706281(-) A-G intron -    22484847
chr8:54706282(-) A-G intron -    22484847
chr8:54706399(-) A-G intron -    22484847
chr8:54706416(-) A-G intron -    22484847
chr8:54706421(-) A-G intron -    22484847
chr8:54721360(-) G-T intron -    22484847
chr8:54736197(-) A-G intron -    22484847
chr8:54747124(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATP6V1H
chr8:54755713-54755714(-) m6A 5'UTR//exon       24284625//24981863//22575960
chr8:54755721-54755722(-) m6A 5'UTR//exon       24284625//24981863//22575960
chr8:54755765-54755766(-) m6A 5'UTR//exon       24284625//24981863//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ATP6V1H
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: ATP6V1H

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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