Detail Information

Basic Information:


  VIRBase ID:  

VHID00005028

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 GRHL1
miRBase
Accession/Entrez ID		 zikv-mir-1 29841
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - LBP32//MGR//NH32//TFCP2L2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GRHL1
chr2:10140191(+) A-I      intronic
chr2:10129822(+) A-I      intronic
chr2:10097209(+) A-I      intronic
chr2:10135491(+) A-I      intronic
chr2:10134290(+) A-I      intronic
chr2:10134373(+) A-I      intronic
chr2:10134498(+) A-I      intronic
chr2:10096569(+) A-I      intronic
chr2:10119556(+) A-I      intronic
chr2:10129806(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GRHL1
chr2:10119437(+) A-I intron -    21960545
chr2:10134373(+) A-I intron -    21960545
chr2:10135495(+) A-I intron -    21960545

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GRHL1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: GRHL1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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