Detail Information

Basic Information:


  VIRBase ID:  

VHID00003728

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 TIMM17B
miRBase
Accession/Entrez ID		 zikv-mir-1 10245
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - DXS9822//JM3//TIM17B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TIMM17B
chrX:48753575(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TIMM17B
chrX:48750921-48750922(-) m6A 3'UTR//exon       27773535//22575960
chrX:48751081-48751082(-) m6A 3'UTR//CDS//exon       27773535
chrX:48754393-48754394(-) m6A exon//intron       25456834//24981863
chrX:48754895-48754896(-) m6A 5'UTR//intron       25456834//24981863
chrX:48754904-48754905(-) m6A 5'UTR//intron       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TIMM17B
Cytosol K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: TIMM17B

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...