Detail Information

Basic Information:


  VIRBase ID:  

VHID00003037

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 TNFRSF25
miRBase
Accession/Entrez ID		 zikv-mir-1 8718
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - APO-3//DDR3//DR3//GEF720//LARD//PLEKHG5//TNFRSF12//TR3//TRAMP//WSL-1//WSL-LR

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TNFRSF25
chr1:6523664(-) A-I      ncRNA
chr1:6524063(-) A-I      intronic
chr1:6524101(-) A-I      intronic
chr1:6523726(-) A-I      intronic
chr1:6523703(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TNFRSF25
chr1:6521417-6521418(-) m6A 3'UTR//exon       24981863//26404942
chr1:6521524-6521525(-) m6A 3'UTR//CDS//exon       25456834
chr1:6521629-6521630(-) m6A 3'UTR//CDS//exon       27773536
chr1:6522211-6522212(-) m6A 3'UTR//CDS//exon       27371828
chr1:6522412-6522413(-) m6A exon//intron       27371828
chr1:6522439-6522440(-) m6A exon//intron       27371828
chr1:6526223-6526224(-) m6A 5'UTR       27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TNFRSF25
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: TNFRSF25

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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