Detail Information

Basic Information:


  VIRBase ID:  

VHID00002259

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 RYR3
miRBase
Accession/Entrez ID		 zikv-mir-1 6263
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - RYR-3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RYR3
chr15:33615027(+) A-I      intronic
chr15:33615089(+) A-I      intronic
chr15:33615062(+) A-I      intronic
chr15:33615061(+) A-I      intronic
chr15:33615059(+) A-I      intronic
chr15:33663618(+) A-I      intronic
chr15:33663621(+) A-I      intronic
chr15:33663629(+) A-I      intronic
chr15:33615053(+) A-I      intronic
chr15:33663622(+) A-I      intronic
chr15:34142365(+) A-I      intronic
chr15:33618128(+) A-I      intronic
chr15:34142403(+) A-I      intronic
chr15:34098653(+) A-I      intronic
chr15:34048249(+) A-I      intronic
chr15:34057153(+) A-I      intronic
chr15:33875913(+) A-I      intronic
chr15:34142304(+) A-I      intronic
chr15:34099172(+) A-I      intronic
chr15:34141244(+) A-I      intronic
chr15:33875920(+) A-I      intronic
chr15:34098974(+) A-I      intronic
chr15:34048047(+) A-I      intronic
chr15:34142394(+) A-I      intronic
chr15:34038824(+) A-I      intronic
chr15:34142461(+) A-I      intronic
chr15:33875921(+) A-I      intronic
chr15:34142430(+) A-I      intronic
chr15:34142370(+) A-I      intronic
chr15:33860732(+) A-I      intronic
chr15:34142404(+) A-I      intronic
chr15:33633514(+) A-I      intronic
chr15:33860735(+) A-I      intronic
chr15:34146270(+) A-I      intronic
chr15:33975361(+) A-I      intronic
chr15:34098599(+) A-I      intronic
chr15:34038835(+) A-I      intronic
chr15:33663749(+) A-I      intronic
chr15:34146254(+) A-I      intronic
chr15:34039247(+) A-I      intronic
chr15:33640777(+) A-I      intronic
chr15:34098620(+) A-I      intronic
chr15:34039246(+) A-I      intronic
chr15:34039286(+) A-I      intronic
chr15:33633271(+) A-I      intronic
chr15:34039277(+) A-I      intronic
chr15:33670121(+) A-I      intronic
chr15:33615186(+) A-I      intronic
chr15:34004403(+) A-I      intronic
chr15:34142326(+) A-I      intronic
chr15:34002322(+) A-I      intronic
chr15:34142418(+) A-I      intronic
chr15:34004267(+) A-I      intronic
chr15:34098973(+) A-I      intronic
chr15:34098612(+) A-I      intronic
chr15:33865090(+) A-I      intronic
chr15:34142495(+) A-I      intronic
chr15:33808737(+) A-I      intronic
chr15:34039743(+) A-I      intronic
chr15:33629002(+) A-I      intronic
chr15:33630353(+) A-I      intronic
chr15:33903597(+) A-I      intronic
chr15:33663745(+) A-I      intronic
chr15:34002609(+) A-I      intronic
chr15:34039175(+) A-I      intronic
chr15:34005844(+) A-I      intronic
chr15:33629003(+) A-I      intronic
chr15:34038753(+) A-I      intronic
chr15:34142327(+) A-I      intronic
chr15:34004201(+) A-I      intronic
chr15:33633263(+) A-I      intronic
chr15:34099173(+) A-I      intronic
chr15:33633475(+) A-I      intronic
chr15:34098652(+) A-I      intronic
chr15:33732307(+) A-I      intronic
chr15:34098598(+) A-I      intronic
chr15:34142462(+) A-I      intronic
chr15:34002814(+) A-I      intronic
chr15:33630420(+) A-I      intronic
chr15:34118063(+) A-I      intronic
chr15:34002011(+) A-I      intronic
chr15:34002321(+) A-I      intronic
chr15:34002319(+) A-I      intronic
chr15:34038766(+) A-I      intronic
chr15:34098616(+) A-I      intronic
chr15:34004296(+) A-I      intronic
chr15:34098621(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RYR3
chr15:33603294-33603295(+) m6A CDS       -
chr15:34130189-34130190(+) m6A CDS       27773535
chr15:34130227-34130228(+) m6A CDS       27773535
chr15:34130258-34130259(+) m6A CDS       27773535
chr15:34130854-34130855(+) m6A CDS       -
chr15:34130969-34130970(+) m6A CDS       -
chr15:34131113-34131114(+) m6A CDS       24981863//27773535
chr15:34134087-34134088(+) m6A CDS       24981863//27773535
chr15:34134093-34134094(+) m6A CDS       24981863//27773535
chr15:34134125-34134126(+) m6A CDS       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RYR3
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: RYR3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...