Detail Information

Basic Information:


  VIRBase ID:  

VHID00001470

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 LOX
miRBase
Accession/Entrez ID		 zikv-mir-1 4015
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - AAT10

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LOX
chr5:121399323-121399324(-) m6A 3'UTR       27773535
chr5:121399903-121399904(-) m6A 3'UTR       27773535
chr5:121399917-121399918(-) m6A 3'UTR       27773535
chr5:121399970-121399971(-) m6A 3'UTR       27773535
chr5:121400002-121400003(-) m6A 3'UTR       27773535
chr5:121400012-121400013(-) m6A 3'UTR       27773535
chr5:121400022-121400023(-) m6A 3'UTR       27773535
chr5:121400071-121400072(-) m6A 3'UTR       27773535
chr5:121400099-121400100(-) m6A 3'UTR       27773535
chr5:121401960-121401961(-) m6A 3'UTR//exon       27773535
chr5:121401990-121401991(-) m6A 3'UTR//exon       27773535
chr5:121402039-121402040(-) m6A 3'UTR//exon       27773535
chr5:121402050-121402051(-) m6A 3'UTR//exon       27773535
chr5:121402069-121402070(-) m6A 3'UTR//exon       27773535
chr5:121402075-121402076(-) m6A 3'UTR//exon       27773535
chr5:121402305-121402306(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr5:121402328-121402329(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr5:121402335-121402336(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr5:121402373-121402374(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr5:121402423-121402424(-) m6A 3'UTR//exon       24981863//22608085
chr5:121411156-121411157(-) m6A 3'UTR//CDS//exon       27773535
chr5:121411164-121411165(-) m6A 3'UTR//CDS//exon       27773535
chr5:121412599-121412600(-) m6A CDS//exon//intron       27773535
chr5:121412771-121412772(-) m6A exon//intron       22608085
chr5:121412894-121412895(-) m6A exon//intron       25456834//24981863//22608085
chr5:121413098-121413099(-) m6A CDS       24284625//24981863//22608085
chr5:121413244-121413245(-) m6A CDS       24284625//24981863//22575960
chr5:121413249-121413250(-) m6A CDS       24284625//24981863//22575960
chr5:121413468-121413469(-) m6A CDS       27773536
chr5:121413531-121413532(-) m6A CDS       27773536
chr5:121413808-121413809(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr5:121413901-121413902(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27773536//22575960//22608085
chr5:121413932-121413933(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr5:121413951-121413952(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LOX
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Endoplasmic reticulum Human fibrosarcoma cells (HT1080)     25753659
Exosome Blood     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: LOX

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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