Detail Information

Basic Information:


  VIRBase ID:  

VHID00000811

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 EIF4A2
miRBase
Accession/Entrez ID		 zikv-mir-1 1974
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - BM-010//DDX2B//eIF-4A-II//EIF4A//eIF4A-II//EIF4F

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EIF4A2
chr3:186501462-186501463(+) Am intron       -
chr3:186502635-186502636(+) Am exon//intron       -
chr3:186502791-186502792(+) m6A CDS//exon//intron       -
chr3:186502845-186502846(+) m6A CDS//exon//intron       -
chr3:186502877-186502878(+) m6A CDS//exon//intron       -
chr3:186503825-186503826(+) m6A 3'UTR//CDS//exon       27773535
chr3:186504596-186504597(+) Tm exon//intron       -
chr3:186505101-186505102(+) m6A exon//intron       27773535
chr3:186505213-186505214(+) Cm exon//intron       -
chr3:186505658-186505659(+) m6A 3'UTR//CDS//exon       24981863//27773535
chr3:186506080-186506081(+) m6A exon//intron       27773535
chr3:186506178-186506179(+) m6A 3'UTR//exon//intron       27773535
chr3:186506301-186506302(+) m6A exon//intron       27773535
chr3:186506823-186506824(+) m6A exon//intron       24981863
chr3:186506957-186506958(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535
chr3:186506975-186506976(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535
chr3:186507001-186507002(+) m6A 3'UTR//CDS//exon       24284625//24981863//27773535
chr3:186507260-186507261(+) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:186507381-186507382(+) m6A 3'UTR//exon       24981863//27773535
chr3:186507425-186507426(+) m6A 3'UTR//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EIF4A2
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: EIF4A2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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