Detail Information

Basic Information:


  VIRBase ID:  

VHID00000452

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-1 MS4A1
miRBase
Accession/Entrez ID		 zikv-mir-1 931
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - B1//Bp35//CD20//CVID5//FMC7//LEU-16//MS4A2//S7

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MS4A1
chr11:60229198(+) A-I      intronic
chr11:60227509(+) A-I      intronic
chr11:60229134(+) A-I      intronic
chr11:60227518(+) A-I      intronic
chr11:60229254(+) A-I      intronic
chr11:60229092(+) A-I      intronic
chr11:60227517(+) A-I      intronic
chr11:60229093(+) A-I      intronic
chr11:60229024(+) A-I      intronic
chr11:60227523(+) A-I      intronic
chr11:60224347(+) A-I      intronic
chr11:60229202(+) A-I      intronic
chr11:60229213(+) A-I      intronic
chr11:60229073(+) A-I      intronic
chr11:60229012(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MS4A1
chr11:60224347(+) A-G intron -    22484847
chr11:60227509(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MS4A1
chr11:60235757-60235758(+) m6A CDS//exon       -
chr11:60235800-60235801(+) m6A CDS//exon       -
chr11:60235828-60235829(+) m6A CDS       -
chr11:60235869-60235870(+) m6A CDS       -
chr11:60235879-60235880(+) m6A CDS       -
chr11:60235889-60235890(+) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MS4A1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-1
Interactor2: MS4A1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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