Detail Information

Basic Information:


  VIRBase ID:  

HVID00010650

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-12119 ORF8
miRBase
Accession/Entrez ID		 MIMAT0049013 43740577
Organism Homo sapiens SARS-CoV-2 (NC_045512.2)
Category miRNA mRNA
Alias - GU280_gp09

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-12119
rs1022328368 chr7:99409199    G/T
rs1033766342 chr7:99409196    G/T
rs1298269453 chr7:99409198    C/T
rs35842908 chr7:99409210    G/A
rs529299106 chr7:99409202    A/C
rs544580647 chr7:99409207    T/C
rs1217373031 chr7:99409187    TTCTGAGGGGACGGTAGATTTGGGGGTTTTCC/T
rs138620687 chr7:99409189    C/G
rs781429112 chr7:99409176    CACGTTCGTTCTTCTGAGGGG/C

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-12119
Interactor2: ORF8

Evidence Support:


Prediction-Evidence miRBase
Support Database ViRBase

References:


PMID 32547891 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Among 2,654 mature entries of Homo sapiens in miRBase Release 22.1, 479 of them could target SARS-CoV-2 genes (Supplemental Files-human to virus). While Envelope and ORF6 genes were targeted by single miRNAs, ORF1ab appeared to be the target of 369 different human mature miRNAs (Table 2).

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