Detail Information

Basic Information:


  VIRBase ID:  

HVID00009617

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-1207-5p S
miRBase
Accession/Entrez ID		 MIMAT0005871 43740568
Organism Homo sapiens SARS-CoV-2 (NC_045512.2)
Category miRNA mRNA
Alias - GU280_gp02//spike glycoprotein

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-1207-5p
rs1162462540 chr8:128049168    G/C
rs1394700067 chr8:128049170    C/G
rs1554607207 chr8:128049169    G/T
rs191866221 chr8:128049176    G/A
rs748926661 chr8:128049159    T/C
rs924251812 chr8:128049179    G/T
rs978439162 chr8:128049177    G/C
rs370875844 chr8:128049163    A/G
rs555358194 chr8:128049162    C/T
rs902893728 chr8:128049165    G/T

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-1207-5p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-1207-5p
Vincristine 5978 Drug interaction    RC00007710
Eloxatine 5310940 Drug interaction    RC00007712
Imatinib 5291 Drug interaction    RC00007709
Ginsenoside Rh2 119307 Drug interaction    RC00007711
Testosterone + 1,25-Dihydroxyvitamin D3 - Drug interaction    RC00007713
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-1207-5p
Gemcitabine 60750       30341811
Imatinib 5291       25349971
Paclitaxel 36314       30655858

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-1207-5p
Interactor2: S

Evidence Support:


Prediction-Evidence ComiR//miRanda//PITA//Targetscan
Support Database ViRBase

References:


PMID 33194826 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Among the predicted miRNA:viral RNA interacting pairs (specific target locations), six were identified by all four algorithms (Figures 1B, C).

Starting a new search, please wait ...