Detail Information

Basic Information:


  VIRBase ID:  

HVID00009574

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-885-3p N
miRBase
Accession/Entrez ID		 MIMAT0004948 43740575
Organism Homo sapiens SARS-CoV-2 (NC_045512.2)
Category miRNA mRNA
Alias - GU280_gp10

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-885-3p
rs1165987101 chr3:10394512    C/T
rs1180950127 chr3:10394504    A/G
rs1476475429 chr3:10394501    T/C
rs189766364 chr3:10394510    C/G
rs576167417 chr3:10394503    C/T
rs746083099 chr3:10394502    C/T
rs376907509 chr3:10394517    G/A
rs775489938 chr3:10394513    C/A
rs775489938 chr3:10394513    C/T
rs941703617 chr3:10394514    G/A
rs941703617 chr3:10394514    G/T

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-885-3p
Exosome Pooled sera     27278097
Exosome Plasma     23663360
Exosome Serum     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Follicular fluid     23666971
Microvesicle Fibroblasts|Mesenchymal stem cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-885-3p
D-Glucose 5793 Drug interaction    RC00007424
Eloxatine 5310940 Drug interaction    RC00007426
Doxorubicin 31703 Drug interaction    RC00007425
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007423
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-885-3p
Doxorubicin 31703       25698578

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-885-3p
Interactor2: N

Evidence Support:


Prediction-Evidence miRanda//miRTarP
Support Database ViRBase

References:


PMID 33801496 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Additionally, if targets are selected by both tools in at least two strains of SARS-CoV-2, we only considered them as potential targets of miRNA on SARS-CoV-2 (Table S2). In Table 1, we present the list of miRNAs meeting all these criteria.

Starting a new search, please wait ...