Detail Information

Basic Information:


  VIRBase ID:  

HVID00009482

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-187-5p M
miRBase
Accession/Entrez ID		 MIMAT0004561 43740571
Organism Homo sapiens SARS-CoV-2 (NC_045512.2)
Category miRNA mRNA
Alias - GU280_gp05

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-187-5p
rs1194914938 chr18:35904892    C/T
rs1266156205 chr18:35904882    G/A
rs1266156205 chr18:35904882    G/C
rs375688661 chr18:35904874    C/T
rs750883328 chr18:35904875    G/A
rs750883328 chr18:35904875    G/T
rs756713200 chr18:35904879    C/A
rs762089591 chr18:35904871    G/A
rs918656401 chr18:35904877    G/A
rs961850563 chr18:35904872    C/A
rs961850563 chr18:35904872    C/T
rs1453856810 chr18:35904888    T/C
rs765955640 chr18:35904886    T/C
rs952851972 chr18:35904889    A/G
rs984527708 chr18:35904891    C/T

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-187-5p
Exosome Breast milk     22211110
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Mesenchymal stem cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-187-5p
Trastuzumab - Drug interaction    RC00006895
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-187-5p
Paclitaxel 36314       31063487
Docetaxel 148124       31063487

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-187-5p
Interactor2: M

Evidence Support:


Prediction-Evidence miRanda//miRTarP
Support Database ViRBase

References:


PMID 33801496 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Additionally, if targets are selected by both tools in at least two strains of SARS-CoV-2, we only considered them as potential targets of miRNA on SARS-CoV-2 (Table S2). In Table 1, we present the list of miRNAs meeting all these criteria.

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