Detail Information

Basic Information:


  VIRBase ID:  

HVID00009171

  Virus:  

SARS-CoV-2 (MTO49951.1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-7108-5p 3'UTR
miRBase
Accession/Entrez ID		 MIMAT0028113 3'UTR
Organism Homo sapiens SARS-CoV-2 (MTO49951.1)
Category miRNA unassigned RNA
Alias -

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-7108-5p
rs1419569840 chr19:2434984    C/T
rs1467338695 chr19:2434988    C/T
rs187280487 chr19:2434980    C/T
rs368113823 chr19:2434985    C/A
rs368113823 chr19:2434985    C/G
rs368113823 chr19:2434985    C/T
rs371996134 chr19:2434986    G/A
rs759467998 chr19:2434990    G/T
rs772053278 chr19:2434992    C/G
rs772053278 chr19:2434992    C/T
rs993281010 chr19:2434982    A/C
rs993281010 chr19:2434982    A/T
rs1277612773 chr19:2434994    G/A
rs1350642998 chr19:2434996    C/G
rs375918278 chr19:2434993    G/A
rs760544062 chr19:2434995    C/A

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-7108-5p
Exosome Pooled sera     27278097
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Mesenchymal stem cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-7108-5p
Interactor2: 3'UTR

Evidence Support:


Prediction-Evidence miRWalk//RNAHybrid//TransmiR
Support Database ViRBase

References:


PMID 32835083 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description According to affinity examination between 3'UTR of SARS-CoV-2 and all 1872 miRNAs, 42 miRNAs with the highest score were identified (Table 3 ).

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