Detail Information

Basic Information:


  VIRBase ID:  

HVID00009141

  Virus:  

SARS-CoV-2 (MTO49951.1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-449b-5p 3'UTR
miRBase
Accession/Entrez ID		 MIMAT0003327 3'UTR
Organism Homo sapiens SARS-CoV-2 (MTO49951.1)
Category miRNA unassigned RNA
Alias -

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-449b-5p
rs10061133 chr5:55170716    A/G
rs1431829587 chr5:55170715    C/G
rs769526811 chr5:55170718    T/C
rs778042202 chr5:55170707    C/T
rs1322925717 chr5:55170725    C/CCTACCTG

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-449b-5p
Exosome Renal cancer cells     21670082
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-449b-5p
Interactor2: 3'UTR

Evidence Support:


Prediction-Evidence miRWalk//RNAHybrid//TransmiR
Support Database ViRBase

References:


PMID 32835083 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description According to affinity examination between 3'UTR of SARS-CoV-2 and all 1872 miRNAs, 42 miRNAs with the highest score were identified (Table 3 ).

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