Detail Information

Basic Information:


  VIRBase ID:  

HVID00008647

  Virus:  

SARS coronavirus Tor2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-7704 sars9b
miRBase
Accession/Entrez ID		 MIMAT0030019 1489679
Organism Homo sapiens SARS coronavirus Tor2
Category miRNA mRNA
Alias - sars9b

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-7704
rs1360550000 chr2:176188855    C/G
rs1360550000 chr2:176188855    C/T
rs1386254542 chr2:176188851    G/T
rs1445123870 chr2:176188858    C/A
rs1445123870 chr2:176188858    C/T
rs1456371869 chr2:176188852    C/A
rs1456371869 chr2:176188852    C/T
rs754598967 chr2:176188859    G/C
rs754598967 chr2:176188859    G/T
rs932209519 chr2:176188853    G/A
rs1161076832 chr2:176188849    C/T
rs1279026482 chr2:176188845    G/A
rs746543378 chr2:176188848    T/G

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-7704
Exosome Pooled sera     27278097
Exosome Colon tissue|Lymphoma tissue     -
Microvesicle Colon cancer cell line (LIM1863)     25330373
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-7704
Interactor2: sars9b

Evidence Support:


Prediction-Evidence miRTarP
Support Database ViRBase

References:


PMID 33173539 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).

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