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Detail Information
Basic Information:
VIRBase ID:
HVID00008468
Virus:
SARS coronavirus Tor2
Host:
Homo sapiens
Confidence Score:
0.1828
Interaction Type:
Host-Virus interaction
Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-6850-5p
sars9b
miRBase
Accession/Entrez ID
MIMAT0027600
1489679
Organism
Homo sapiens
SARS coronavirus Tor2
Category
miRNA
mRNA
Alias
-
sars9b
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-6850-5p
rs1164773569
chr8:144791973
C/A
rs1358686016
chr8:144791972
C/A
rs1362812096
chr8:144791978
C/T
rs1460308623
chr8:144791971
GC/G
rs200039333
chr8:144791975
C/T
rs370097454
chr8:144791983
G/A
rs370097454
chr8:144791983
G/T
rs375814230
chr8:144791981
G/C
rs748367262
chr8:144791970
C/A
rs748367262
chr8:144791970
C/T
rs772288137
chr8:144791976
G/A
rs772288137
chr8:144791976
G/C
rs111376131
chr8:144791989
C/G
rs111376131
chr8:144791989
C/T
rs111710483
chr8:144791990
A/T
rs1160376103
chr8:144791984
T/C
rs1400058311
chr8:144791987
C/T
rs1423245225
chr8:144791986
C/T
rs777346795
chr8:144791988
G/A
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-6850-5p
Exosome
Pooled sera
27278097
Exosome
Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine
-
Microvesicle
Fibroblasts|Mesenchymal stem cells
-
Interaction Network
(The top 100 interactions)
:
Interactor1: hsa-miR-6850-5p
Interactor2: sars9b
Evidence Support:
Prediction-Evidence
miRTarP
Support Database
ViRBase
References:
PMID
33173539
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
None
Interactor2 expression
None
Description
Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).
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