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Detail Information
Basic Information:
VIRBase ID:
HVID00008425
Virus:
SARS coronavirus Tor2
Host:
Homo sapiens
Confidence Score:
0.1828
Interaction Type:
Host-Virus interaction
Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-6836-5p
sars9b
miRBase
Accession/Entrez ID
MIMAT0027574
1489679
Organism
Homo sapiens
SARS coronavirus Tor2
Category
miRNA
mRNA
Alias
-
sars9b
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-6836-5p
rs1175923434
chr7:2257551
A/T
rs1397797431
chr7:2257557
G/T
rs1402374487
chr7:2257560
C/T
rs373301992
chr7:2257555
C/T
rs751019973
chr7:2257572
G/A
rs751019973
chr7:2257572
G/T
rs752401585
chr7:2257559
G/A
rs752401585
chr7:2257559
G/C
rs762697510
chr7:2257562
A/T
rs765066033
chr7:2257558
C/A
rs765066033
chr7:2257558
C/T
rs767238780
chr7:2257563
G/A
rs767238780
chr7:2257563
G/T
rs776617786
chr7:2257553
G/A
rs776617786
chr7:2257553
G/T
rs1378787511
chr7:2257565
G/A
rs747250755
chr7:2257571
C/CT
rs756757197
chr7:2257570
G/A
rs768462924
chr7:2257568
C/G
rs780841384
chr7:2257571
C/A
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-6836-5p
Exosome
Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine
-
Microvesicle
Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes
-
Interaction Network
(The top 100 interactions)
:
Interactor1: hsa-miR-6836-5p
Interactor2: sars9b
Evidence Support:
Prediction-Evidence
miRTarP
Support Database
ViRBase
References:
PMID
33173539
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
None
Interactor2 expression
None
Description
Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).
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