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Detail Information
Basic Information:
VIRBase ID:
HVID00008309
Virus:
SARS coronavirus Tor2
Host:
Homo sapiens
Confidence Score:
0.1828
Interaction Type:
Host-Virus interaction
Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-6796-5p
sars9b
miRBase
Accession/Entrez ID
MIMAT0027492
1489679
Organism
Homo sapiens
SARS coronavirus Tor2
Category
miRNA
mRNA
Alias
-
sars9b
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-6796-5p
rs1053727562
chr19:40369866
G/C
rs1222726618
chr19:40369869
G/A
rs1222726618
chr19:40369869
G/C
rs201676060
chr19:40369861
G/T
rs778167483
chr19:40369865
A/T
rs893810207
chr19:40369871
C/A
rs893810207
chr19:40369871
C/G
rs907257403
chr19:40369870
G/T
rs748185367
chr19:40369856
G/C
rs748185367
chr19:40369856
G/T
rs770021429
chr19:40369858
G/T
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-6796-5p
Exosome
Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine
-
Microvesicle
Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes
-
Interaction Network
(The top 100 interactions)
:
Interactor1: hsa-miR-6796-5p
Interactor2: sars9b
Evidence Support:
Prediction-Evidence
miRTarP
Support Database
ViRBase
References:
PMID
33173539
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
None
Interactor2 expression
None
Description
Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).
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