Detail Information

Basic Information:


  VIRBase ID:  

HVID00008190

  Virus:  

SARS coronavirus Tor2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-6753-3p sars9b
miRBase
Accession/Entrez ID		 MIMAT0027407 1489679
Organism Homo sapiens SARS coronavirus Tor2
Category miRNA mRNA
Alias - sars9b

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-6753-3p
rs1241815843 chr11:68044942    C/A
rs1241815843 chr11:68044942    C/T
rs1250277051 chr11:68044951    C/T
rs528153336 chr11:68044944    G/T
rs751603708 chr11:68044953    C/A
rs1214791319 chr11:68044938    G/A
rs1445080366 chr11:68044936    C/A
rs542024448 chr11:68044933    G/A
rs560771556 chr11:68044935    T/A
rs560771556 chr11:68044935    T/G
rs753872551 chr11:68044934    G/A

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-6753-3p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Colon cancer cell line (LIM1863)|Mesenchymal stem cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-6753-3p
Interactor2: sars9b

Evidence Support:


Prediction-Evidence miRTarP
Support Database ViRBase

References:


PMID 33173539 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).

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