Detail Information

Basic Information:


  VIRBase ID:  

HVID00007993

  Virus:  

SARS coronavirus Tor2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-6090 N
miRBase
Accession/Entrez ID		 MIMAT0023715 1489678
Organism Homo sapiens SARS coronavirus Tor2
Category miRNA mRNA
Alias - sars9a

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-6090
rs1029167197 chr11:128522430    G/A
rs1029167197 chr11:128522430    G/T
rs1376145295 chr11:128522443    C/T
rs1428471711 chr11:128522439    G/GGGGCGGGGCGTCGGGGCA
rs1455698166 chr11:128522440    G/A
rs909804504 chr11:128522442    G/C
rs953585374 chr11:128522441    G/A
rs953585374 chr11:128522441    G/T
rs1029770131 chr11:128522432    G/A
rs953749898 chr11:128522433    G/T
rs985507334 chr11:128522435    G/A

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-6090
Exosome Pooled sera     27278097
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Urine     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-6090
Interactor2: N

Evidence Support:


Prediction-Evidence miRTarP
Support Database ViRBase

References:


PMID 33173539 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).

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