Detail Information

Basic Information:


  VIRBase ID:  

HVID00007687

  Virus:  

SARS coronavirus Tor2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-4741 sars9b
miRBase
Accession/Entrez ID		 MIMAT0019871 1489679
Organism Homo sapiens SARS coronavirus Tor2
Category miRNA mRNA
Alias - sars9b

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-4741
rs1027887214 chr18:22933416    C/T
rs1380799029 chr18:22933417    G/A
rs1482292247 chr18:22933419    A/AG
rs530533933 chr18:22933420    G/A
rs536665939 chr18:22933426    G/A
rs550385932 chr18:22933423    G/A
rs550385932 chr18:22933423    G/C
rs916592914 chr18:22933422    G/A
rs952848411 chr18:22933419    A/G
rs982330999 chr18:22933428    C/G
rs993377434 chr18:22933415    C/T
rs115479920 chr18:22933413    G/A
rs1301823545 chr18:22933407    CGG/C
rs559384120 chr18:22933408    G/C
rs559384120 chr18:22933408    G/T
rs561516318 chr18:22933414    T/C
rs561516318 chr18:22933414    T/G
rs7227168 chr18:22933411    C/G
rs7227168 chr18:22933411    C/T
rs886053655 chr18:22933410    G/A

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-4741
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-4741
Interactor2: sars9b

Evidence Support:


Prediction-Evidence miRTarP
Support Database ViRBase

References:


PMID 33173539 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).

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