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Detail Information
Basic Information:
VIRBase ID:
HVID00006753
Virus:
SARS coronavirus Tor2
Host:
Homo sapiens
Confidence Score:
0.1828
Interaction Type:
Host-Virus interaction
Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-500a-5p
sars9b
miRBase
Accession/Entrez ID
MIMAT0004773
1489679
Organism
Homo sapiens
SARS coronavirus Tor2
Category
miRNA
mRNA
Alias
-
sars9b
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-500a-5p
rs1221490724
chrX:50008465
A/G
rs1557181893
chrX:50008443
T/G
rs1557181895
chrX:50008452
C/G
rs1557181897
chrX:50008453
T/A
rs1557181900
chrX:50008458
G/A
rs1557181900
chrX:50008458
G/C
rs1557181904
chrX:50008463
A/T
rs369176381
chrX:50008450
T/G
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-500a-5p
Exosome
Primary dendritic cells
21505438
Exosome
Plasma
23663360
Exosome
Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine
-
Microvesicle
Seminal plasma
23539611
Microvesicle
Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells
-
Mitochondrion
Skeletal muscle myoblasts
21637849
Nucleus
Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)
24918059
Interaction Network
(The top 100 interactions)
:
Interactor1: hsa-miR-500a-5p
Interactor2: sars9b
Evidence Support:
Prediction-Evidence
miRTarP
Support Database
ViRBase
References:
PMID
33173539
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
None
Interactor2 expression
None
Description
Interestingly, we observed that 717 miRNAs targeting SARS-CoV-2 genes are common with those targeting SARS-CoV genes, possibly due to high genome similarity (Xu et al., 2020; Zhang and Holmes, 2020, p. 2) (Supplementary Table S7).
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