Detail Information

Basic Information:


  VIRBase ID:  

HVID00005536

  Virus:  

Orthohepevirus A (HEV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-298 3'UTR (HEV)
miRBase
Accession/Entrez ID		 MIMAT0004901 3'UTR (HEV)
Organism Homo sapiens Orthohepevirus A (HEV)
Category miRNA mRNA
Alias - -

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-298
rs201036298 chr20:58818294    T/G
rs550848896 chr20:58818288    C/A
rs550848896 chr20:58818288    C/T
rs751823623 chr20:58818295    G/T
rs910750200 chr20:58818287    A/G
rs1235209161 chr20:58818299    C/T
rs1331296704 chr20:58818298    T/C
rs755174560 chr20:58818297    T/C

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-298
Exosome Serum     18589210
Exosome K562 cells     24460325
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-298

Evidence Support:


Prediction-Evidence miRDB
Support Database ViRBase

References:


PMID 32751663 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description We used miRDB interactive software [17] to identify microRNAs targeting the 3'UTRs of 35 HCV and 39 HEV database sequences. A number of the identified microRNAs were not included in the version of the TaqMan array cards we used, as they were discovered more recently (Table 4).

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