Detail Information

Basic Information:


  VIRBase ID:  

HVID00001882

  Virus:  

Kedougou virus

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Virus interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-28-5p POLY
miRBase
Accession/Entrez ID		 MIMAT0000085 7751227
Organism Homo sapiens Kedougou virus
Category miRNA mRNA
Alias - KEDV_gp1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-28-5p
rs1211406812 chr3:188688805    A/T
rs1315387654 chr3:188688811    T/G
rs1333243027 chr3:188688802    C/A
rs1350747725 chr3:188688807    T/C
rs1380324091 chr3:188688806    G/A
rs1380847802 chr3:188688813    G/GGGAA
rs564264103 chr3:188688810    A/G
rs1466099417 chr3:188688800    C/T

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-28-5p
Cytoplasm Neural progenitor cells     21363885
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome Primary dendritic cells|T cell line (J77)     21505438
Exosome Brain tissue     23382797
Exosome Plasma     23663360
Exosome Seminal fluid     -
Microvesicle Seminal plasma     23539611
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function
ncDR hsa-miR-28-5p
Kinetin riboside 20345 Drug resistant
michicarcin - Drug resistant
Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-28-5p
Formaldehyde 712 Drug interaction    RC00000838
Gemcitabine 60750 Drug interaction    RC00000844
Morphine 5288826 Drug interaction    RC00000848
Cholecalciferol 5280795 Drug interaction    RC00000847
Decitabine 451668 Drug interaction    RC00000846
Epirubicin 41867 Drug interaction    RC00000843
Paclitaxel 36314 Drug interaction    RC00000842
Doxorubicin 31703 Drug interaction    RC00000841
Verapamil 2520 Drug interaction    RC00000839
Ginsenoside Rh2 119307 Drug interaction    RC00000845
Methamphetamine 10836 Drug interaction    RC00000840
Trastuzumab - Drug interaction    RC00000849
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-28-5p
Imatinib 5291       30249101
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-28-5p
Panobinostat       6918837
Irinotecan       60838
Topotecan       60700
l-685,458       5479543
Paclitaxel       36314
5-Chloro-N4-(2-(isopropylsulfonyl)phenyl)-N2-(2-methoxy-4-(4-(4-methylpiperazin-1-yl)piperidin-1-yl)phenyl)pyrimidine-2,4-diamine       16038120
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-28-5p
Interactor2: POLY

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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