Detail Information

Basic Information:


  VIRBase ID:  

HHID00109698

  Virus:  

Transmissible gastroenteritis virus (Shaanxi strain,TGEV)

  Host:  

Sus scrofa

  Confidence Score:  

0.9806

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol ssc-miR-4331-3p CDCA7
miRBase
Accession/Entrez ID		 MIMAT0017955 100154583
Organism Sus scrofa Sus scrofa
Category miRNA mRNA
Alias - -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ssc-miR-4331-3p
Exosome Porcine milk     24499489

Interaction Network (The top 100 interactions):


Interactor1: ssc-miR-4331-3p
Interactor2: CDCA7

Evidence Support:


Strong-Evidence Luciferase reporter assay//RT-PCR//Western blot
Weak-Evidence MiRNA microarray
Prediction-Evidence miRanda//Targetscan
Support Database ViRBase

References:


PMID 26157346 Target region 3'UTR
Source ViRBase Interactor1 expression Upregulation
Tissue or cell line PK-15 cells Interactor2 expression Downregulation
Description MiR-4331 showed the ability to inhibit transcription of TGEV gene 7 (a non-structure gene) via directly targeting CDCA7.

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