Detail Information

Basic Information:


  VIRBase ID:  

HHID00109492

  Virus:  

Severe acute respiratory syndrome-related coronavirus (SARS)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol mmu-miR-24-3p Mxd1
miRBase
Accession/Entrez ID		 MIMAT0000219 17119
Organism Mus musculus Mus musculus
Category miRNA TF
Alias - AW122478//Ma//Mad//Mad1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Mxd1
chr6:86648007-86648008(-) m6A 3'UTR       24981863
chr6:86648028-86648029(-) m6A 3'UTR       24981863
chr6:86648050-86648051(-) m6A 3'UTR       24981863
chr6:86648078-86648079(-) m6A 3'UTR       24981863
chr6:86648272-86648273(-) m6A 3'UTR       24981863
chr6:86648290-86648291(-) m6A 3'UTR       24981863
chr6:86648295-86648296(-) m6A 3'UTR       24981863
chr6:86648333-86648334(-) m6A 3'UTR       24981863
chr6:86648823-86648824(-) m6A 3'UTR       25683224//22608085
chr6:86648839-86648840(-) m6A 3'UTR       25683224//22608085
chr6:86648878-86648879(-) m6A 3'UTR       25683224//22608085
chr6:86649116-86649117(-) m6A 3'UTR//intron       24981863
chr6:86649161-86649162(-) m6A 3'UTR//intron       25412662//24981863//25569111
chr6:86649198-86649199(-) m6A 3'UTR//intron       25412662//24981863//25569111
chr6:86649533-86649534(-) m6A 3'UTR//intron       24981863
chr6:86649626-86649627(-) m6A 3'UTR//intron       24981863//25569111
chr6:86649648-86649649(-) m6A 3'UTR       24981863//25569111
chr6:86649666-86649667(-) m6A 3'UTR       24981863//25569111
chr6:86649679-86649680(-) m6A 3'UTR//CDS       24981863//25569111
chr6:86650025-86650026(-) m6A 3'UTR//intron       24981863
chr6:86650243-86650244(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr6:86650340-86650341(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111
chr6:86650448-86650449(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86650474-86650475(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86650488-86650489(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86650502-86650503(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86650516-86650517(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86650688-86650689(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111
chr6:86650803-86650804(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr6:86650829-86650830(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr6:86651009-86651010(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86651024-86651025(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86651074-86651075(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr6:86651488-86651489(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr6:86651498-86651499(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr6:86651544-86651545(-) m6A 3'UTR//CDS       25683224//24981863
chr6:86651560-86651561(-) m6A 3'UTR//CDS       25683224//24981863
chr6:86651590-86651591(-) m6A 3'UTR//CDS       24981863
chr6:86651598-86651599(-) m6A 3'UTR//CDS       24981863
chr6:86658103-86658104(-) m6A 3'UTR//intron       24981863
chr6:86658113-86658114(-) m6A CDS//intron       24981863
chr6:86663073-86663074(-) m6A CDS       24981863
chr6:86668567-86668568(-) m6A CDS//exon       25683224
chr6:86668591-86668592(-) m6A CDS//exon       25683224//25412662
chr6:86668626-86668627(-) m6A CDS//exon       25683224//25412662
chr6:86668985-86668986(-) m6A CDS//exon       25412662
chr6:86669143-86669144(-) m6A 5'UTR       25412662

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate mmu-miR-24-3p
Axon DRG neurons     24381269
Exosome Conditioned medium of E13 SMG     28041903
Exosome Serum     28160157
Exosome Mast cells     17486113
Exosome B6 BMDCs     22031862
Exosome Mouse hypothalamic neuronal cell line (GT1-7)     22965126
Exosome Bone marrow-derived macrophages     25159140
Mitochondrion Heart tissue (subsarcolemmal and interfibrillar)     26377859
Nucleus Spermatocytes     18204908
Nucleus Liver cells     21862971

Interaction Network (The top 100 interactions):


Interactor1: mmu-miR-24-3p
Interactor2: Mxd1

Evidence Support:


Prediction-Evidence miRWalk//StarBase
Support Database ViRBase

References:


PMID 32805314 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description The 3-node miRNA FFL comprises 3 major regulatory interaction types (i.e., miRNA-mRNA repression; TF-mRNA regulation; miRNA-TF repression).

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