Basic Information:
VIRBase ID: HHID00109095
Virus: SARS-CoV-2 (NC_045512.2)
Host: Homo sapiens
Confidence Score: 0.1828
Interaction Type: Host-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-548o-5p
GOPC
miRBase Accession/Entrez ID
MIMAT0022738
57120
Organism
Homo sapiens
Homo sapiens
Category
miRNA
mRNA
Alias
-
CAL//dJ94G16.2//FIG//GOPC1//PIST
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-548o-5p
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
GOPC
Resource
Symbol
Editing Position
Change
SeqReg
exReg
PMID
DARNED
GOPC
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
GOPC
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-548o-5p
GOPC
Interaction Network (The top 100 interactions) :
Interactor1: hsa-miR-548o-5p
Interactor2: GOPC
Evidence Support:
Prediction-Evidence
miRDB
Support Database
ViRBase
References:
PMID
33201341
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
None
Interactor2 expression
None
Description
By custom target prediction, a panel of miRNA sequences able to recognize the SARS-CoV-2 sequence was collected. Only targets with a very high score (95-100) were retained for further analyses.