Basic Information:

  VIRBase ID:  

HHID00108426

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-548d-5p:  MIMAT0004812          BMT2:  NM_152556     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-548d-5p	BMT2
miRBase Accession/Entrez ID	MIMAT0004812	154743
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	C7orf60//SAMTOR

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-548d-5p	rs1240978917 chr8:123348085    G/A rs1370161434 chr8:123348096    C/A rs1423052174 chr8:123348086    G/A rs1039169216 chr17:67471540    G/A rs1039169216 chr17:67471540    G/T rs543252291 chr17:67471553    A/G rs1196924094 chr8:123348101    A/G rs756308753 chr8:123348103    T/C rs768094101 chr17:67471554    T/G rs899430888 chr17:67471556    A/T

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BMT2	chr7:112497348(-) A-I      intronic chr7:112497341(-) A-I      intronic chr7:112472336(-) A-I      intronic chr7:112502227(-) A-I      intronic chr7:112501440(-) A-I      intronic chr7:112527112(-) A-I      intronic chr7:112546859(-) A-I      intronic chr7:112546809(-) A-I      intronic chr7:112546805(-) A-I      intronic chr7:112546804(-) A-I      intronic chr7:112546791(-) A-I      intronic chr7:112533813(-) A-I      intronic chr7:112527063(-) A-I      intronic chr7:112505930(-) A-I      intronic chr7:112505917(-) A-I      intronic chr7:112505240(-) A-I      intronic chr7:112472361(-) A-I      intronic chr7:112505054(-) A-I      intronic chr7:112505987(-) A-I      intronic chr7:112504931(-) A-I      intronic chr7:112502228(-) A-I      intronic chr7:112533809(-) A-I      intronic chr7:112530995(-) A-I      intronic chr7:112502198(-) A-I      intronic chr7:112502162(-) A-I      intronic chr7:112555039(-) A-I      intronic chr7:112471707(-) A-I      intronic chr7:112472329(-) A-I      intronic chr7:112506007(-) A-I      intronic chr7:112502201(-) A-I      intronic chr7:112531003(-) A-I      intronic chr7:112490196(-) A-I      intronic chr7:112496469(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-548d-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
	BMT2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID	Function	Link
RNAInter	hsa-miR-548d-5p	Atorvastatin 60823 Drug interaction    RC00007234 D-Glucose 5793 Drug interaction    RC00007233 cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007232

Resource	Symbol	Drug Name	PubChem ID	PMID
NoncoRNA	hsa-miR-548d-5p	Etoposide 36462       23028896

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-548d-5p
Interactor2: BMT2

Evidence Support:

Prediction-Evidence	miRDB
Support Database	ViRBase

References:

PMID	33201341	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	None	Interactor2 expression	None
Description	By custom target prediction, a panel of miRNA sequences able to recognize the SARS-CoV-2 sequence was collected. Only targets with a very high score (95-100) were retained for further analyses.