Detail Information

Basic Information:


  VIRBase ID:  

HHID00107925

  Virus:  

SARS-CoV-2 (NC_045512.2)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-548b-5p:           SACS:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-548b-5p SACS
miRBase
Accession/Entrez ID
MIMAT0004798 26278
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ARSACS//DNAJC29//PPP1R138//SPAX6

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-548b-5p
rs1180266201 chr6:119069102    A/G
rs1338611711 chr6:119069100    C/T
rs188182113 chr6:119069098    G/A
rs188182113 chr6:119069098    G/C
rs1158490090 chr6:119069118    T/C
rs1414502200 chr6:119069112    T/A
rs1472929879 chr6:119069115    C/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SACS
chr13:23968758(-) A-I      intronic
chr13:23968790(-) A-I      intronic
chr13:23968796(-) A-I      intronic
chr13:23968800(-) A-I      intronic
chr13:23968813(-) A-I      intronic
chr13:23983683(-) A-I      intronic
chr13:23983690(-) A-I      intronic
chr13:23983691(-) A-I      intronic
chr13:23983741(-) A-I      intronic
chr13:23942900(-) A-I      intronic
chr13:23968799(-) A-I      intronic
chr13:23942875(-) A-I      intronic
chr13:23942898(-) A-I      intronic
chr13:23945129(-) A-I      intronic
chr13:23970280(-) A-I      intronic
chr13:23944130(-) A-I      intronic
chr13:23935069(-) A-I      intronic
chr13:23944118(-) A-I      intronic
chr13:23943874(-) A-I      intronic
chr13:23937083(-) A-I      intronic
chr13:23935072(-) A-I      intronic
chr13:23935073(-) A-I      intronic
chr13:23942867(-) A-I      intronic
chr13:23945128(-) A-I      intronic
chr13:23938647(-) A-I      intronic
chr13:23944953(-) A-I      intronic
chr13:23944070(-) A-I      intronic
chr13:23917830(-) A-I      intronic
chr13:23944158(-) A-I      intronic
chr13:23944136(-) A-I      intronic
chr13:23917667(-) A-I      intronic
chr13:23938616(-) A-I      intronic
chr13:23938615(-) A-I      intronic
chr13:23937644(-) A-I      intronic
chr13:23970325(-) A-I      intronic
chr13:23935807(-) A-I      intronic
chr13:23936998(-) A-I      intronic
chr13:23935736(-) A-I      intronic
chr13:23944142(-) A-I      intronic
chr13:23973113(-) A-I      intronic
chr13:23935724(-) A-I      intronic
chr13:23935711(-) A-I      intronic
chr13:23935699(-) A-I      intronic
chr13:23935140(-) A-I      intronic
chr13:23933051(-) A-I      intronic
chr13:23935686(-) A-I      intronic
chr13:23968827(-) A-I      intronic
chr13:23935695(-) A-I      intronic
chr13:23944162(-) A-I      intronic
chr13:23933153(-) A-I      intronic
chr13:23983588(-) A-I      intronic
chr13:23983360(-) A-I      intronic
chr13:24004164(-) A-I      intronic
chr13:23944990(-) A-I      intronic
chr13:23944845(-) A-I      intronic
chr13:23974831(-) A-I      intronic
chr13:23974832(-) A-I      intronic
chr13:23959171(-) A-I      intronic
chr13:23945079(-) A-I      intronic
chr13:23945074(-) A-I      intronic
chr13:23945031(-) A-I      intronic
chr13:23983365(-) A-I      intronic
chr13:23933226(-) A-I      intronic
chr13:23973010(-) A-I      intronic
chr13:24004184(-) A-I      intronic
chr13:24004300(-) A-I      intronic
chr13:23933312(-) A-I      intronic
chr13:23944269(-) A-I      intronic
chr13:23944270(-) A-I      intronic
chr13:23935063(-) A-I      intronic
chr13:23945002(-) A-I      intronic
chr13:23935067(-) A-I      intronic
chr13:23935833(-) A-I      intronic
chr13:23964644(-) A-I      intronic
chr13:23970380(-) A-I      intronic
chr13:23935915(-) A-I      intronic
chr13:23934958(-) A-I      intronic
chr13:23983748(-) A-I      intronic
chr13:23945112(-) A-I      intronic
chr13:23917776(-) A-I      intronic
chr13:23942914(-) A-I      intronic
chr13:23972590(-) A-I      intronic
chr13:23917702(-) A-I      intronic
chr13:23973007(-) A-I      intronic
chr13:23942873(-) A-I      intronic
chr13:23935166(-) A-I      intronic
chr13:23959211(-) A-I      intronic
chr13:23935914(-) A-I      intronic
chr13:23981517(-) A-I      intronic
chr13:23986409(-) A-I      intronic
chr13:23970300(-) A-I      intronic
chr13:23945068(-) A-I      intronic
chr13:23944074(-) A-I      intronic
chr13:23945071(-) A-I      intronic
chr13:23916121(-) A-I      intronic
chr13:23917766(-) A-I      intronic
chr13:23944857(-) A-I      intronic
chr13:23936997(-) A-I      intronic
chr13:23917582(-) A-I      intronic
chr13:23981421(-) A-I      intronic
chr13:23981610(-) A-I      intronic
chr13:23959705(-) A-I      intronic
chr13:23935175(-) A-I      intronic
chr13:23945048(-) A-I      intronic
chr13:23944919(-) A-I      intronic
chr13:23968912(-) A-I      intronic
chr13:23944217(-) A-I      intronic
chr13:23944152(-) A-I      intronic
chr13:24004103(-) A-I      intronic
chr13:23983750(-) A-I      intronic
chr13:23983334(-) A-I      intronic
chr13:23916089(-) A-I      intronic
chr13:24004225(-) A-I      intronic
chr13:23937598(-) A-I      intronic
chr13:23970376(-) A-I      intronic
chr13:23944982(-) A-I      intronic
chr13:23968781(-) A-I      intronic
chr13:23916054(-) A-I      intronic
chr13:23944033(-) A-I      intronic
chr13:23917644(-) A-I      intronic
chr13:23945015(-) A-I      intronic
chr13:23916155(-) A-I      intronic
chr13:23916064(-) A-I      intronic
chr13:24004222(-) A-I      intronic
chr13:23935113(-) A-I      intronic
chr13:23917569(-) A-I      intronic
chr13:23943760(-) A-I      intronic
chr13:23917686(-) A-I      intronic
chr13:23935005(-) A-I      intronic
chr13:23935913(-) A-I      intronic
chr13:23974865(-) A-I      intronic
chr13:23944994(-) A-I      intronic
chr13:23935750(-) A-I      intronic
chr13:23944980(-) A-I      intronic
chr13:23937153(-) A-I      intronic
chr13:23976100(-) A-I      intronic
chr13:23972586(-) A-I      intronic
chr13:23983258(-) A-I      intronic
chr13:23944981(-) A-I      intronic
chr13:23944858(-) A-I      intronic
chr13:23975676(-) A-I      intronic
chr13:23986638(-) A-I      intronic
chr13:23944198(-) A-I      intronic
chr13:23917712(-) A-I      intronic
chr13:23944276(-) A-I      intronic
chr13:23944954(-) A-I      intronic
chr13:23975655(-) A-I      intronic
chr13:23933054(-) A-I      intronic
chr13:23981502(-) A-I      intronic
chr13:23917676(-) A-I      intronic
chr13:23968171(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SACS
chr13:23916054(-) A-I intron -    15342557
chr13:23916064(-) A-I intron -    15342557
chr13:23916089(-) A-I intron -    15342557
chr13:23916155(-) A-I intron -    15342557
chr13:23917569(-) A-I intron -    15342557
chr13:23917644(-) A-I intron -    15342557
chr13:23917667(-) A-I intron -    15342557
chr13:23917676(-) A-I intron -    15342557
chr13:23917686(-) A-I intron -    15342557
chr13:23917712(-) A-I intron -    15342557
chr13:23917766(-) A-I intron -    15342557
chr13:23917776(-) A-I intron -    15342557
chr13:23944074(-) A-G intron -    22484847
chr13:23944152(-) A-G intron -    22484847
chr13:23944198(-) A-G intron -    22484847
chr13:23944276(-) A-G intron -    22484847
chr13:23944919(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SACS
chr13:23903873-23903874(-) m6A 3'UTR//intron       26404942//27773535//22608085
chr13:23903890-23903891(-) m6A 3'UTR//intron       26404942//27773535//22608085
chr13:23903897-23903898(-) m6A 3'UTR//intron       24981863//26404942//27773535//22608085
chr13:23904015-23904016(-) m6A 3'UTR//intron       24209618//24981863//26404942//27773535//22608085
chr13:23904087-23904088(-) m6A 3'UTR//intron       24209618//24981863//26404942//27773535//22608085
chr13:23904110-23904111(-) m6A 3'UTR//intron       24209618//24981863//26404942//27773535//22608085
chr13:23904129-23904130(-) m6A 3'UTR//intron       24209618//24981863//26404942//27773535//22608085
chr13:23904304-23904305(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr13:23904408-23904409(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23904419-23904420(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23904460-23904461(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23904511-23904512(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr13:23904644-23904645(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr13:23904658-23904659(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr13:23904739-23904740(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904767-23904768(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904778-23904779(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904845-23904846(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904879-23904880(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904896-23904897(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904922-23904923(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:23904955-23904956(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22608085
chr13:23904983-23904984(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23905141-23905142(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23905152-23905153(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23905247-23905248(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23905273-23905274(-) m6A CDS//intron       24284625//27773535//22608085
chr13:23905502-23905503(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23905558-23905559(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23905564-23905565(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23905609-23905610(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr13:23905730-23905731(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23905739-23905740(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23905800-23905801(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23905851-23905852(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23905906-23905907(-) m6A CDS//intron       24981863//26404942//27773535//22608085
chr13:23905972-23905973(-) m6A CDS//intron       24981863//26404942//27773535//22608085
chr13:23905987-23905988(-) m6A CDS//intron       24981863//26404942//27773535//22608085
chr13:23906058-23906059(-) m6A CDS//intron       24981863//22608085
chr13:23906074-23906075(-) m6A CDS//intron       24981863//22608085
chr13:23906104-23906105(-) m6A CDS//intron       22608085
chr13:23906110-23906111(-) m6A CDS//intron       22608085
chr13:23906153-23906154(-) m6A CDS//intron       22608085
chr13:23906548-23906549(-) m6A CDS//intron       22608085
chr13:23906573-23906574(-) m6A CDS//intron       22608085
chr13:23906602-23906603(-) m6A CDS//intron       22608085
chr13:23906712-23906713(-) m6A CDS//intron       22608085
chr13:23906753-23906754(-) m6A CDS//intron       24981863//22608085
chr13:23906821-23906822(-) m6A CDS//intron       22608085
chr13:23906830-23906831(-) m6A CDS//intron       22608085
chr13:23906860-23906861(-) m6A CDS//intron       22608085
chr13:23906910-23906911(-) m6A CDS//intron       22608085
chr13:23906915-23906916(-) Y CDS//intron       26075521
chr13:23906988-23906989(-) m6A CDS//intron       24981863//22608085
chr13:23907073-23907074(-) m6A CDS//intron       24981863//22608085
chr13:23907156-23907157(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23907170-23907171(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23907244-23907245(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23907301-23907302(-) m6A CDS//intron       24981863//22608085
chr13:23907313-23907314(-) m6A CDS//intron       24981863//22608085
chr13:23907384-23907385(-) m6A CDS//intron       24981863//22608085
chr13:23907415-23907416(-) m6A CDS//intron       24981863//22608085
chr13:23907454-23907455(-) m6A CDS//intron       24981863//22608085
chr13:23907469-23907470(-) m6A CDS//intron       24981863//22608085
chr13:23907577-23907578(-) m6A CDS//intron       24981863//22608085
chr13:23907631-23907632(-) m6A CDS//intron       24981863//22608085
chr13:23907681-23907682(-) m6A CDS//intron       24981863//22608085
chr13:23907732-23907733(-) m6A CDS//intron       24981863//22608085
chr13:23908164-23908165(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908184-23908185(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908219-23908220(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908224-23908225(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908307-23908308(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908332-23908333(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908409-23908410(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908457-23908458(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23908521-23908522(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23908535-23908536(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23908615-23908616(-) m6A CDS//intron       24209618//24981863//22608085
chr13:23908633-23908634(-) m6A CDS//intron       24981863//22608085
chr13:23908644-23908645(-) m6A CDS//intron       24981863//22608085
chr13:23908788-23908789(-) m6A CDS//intron       22608085
chr13:23908837-23908838(-) m6A CDS//intron       24981863//22608085
chr13:23908866-23908867(-) m6A CDS//intron       24981863//22608085
chr13:23908942-23908943(-) m6A CDS//intron       24981863//22608085
chr13:23908947-23908948(-) m6A CDS//intron       24981863//22608085
chr13:23909051-23909052(-) m6A CDS//intron       22608085
chr13:23909153-23909154(-) m6A CDS//intron       24981863//22608085
chr13:23909177-23909178(-) m6A CDS//intron       24981863//22608085
chr13:23909330-23909331(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23909385-23909386(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23909425-23909426(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23909489-23909490(-) m6A CDS//intron       24209618//24981863//27773535//22575960//22608085
chr13:23909585-23909586(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23909627-23909628(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23909680-23909681(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23909696-23909697(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23909806-23909807(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23909831-23909832(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23909855-23909856(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23909941-23909942(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23909952-23909953(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23909988-23909989(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23910113-23910114(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23910154-23910155(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23910159-23910160(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23910310-23910311(-) m6A CDS//intron       -
chr13:23910694-23910695(-) m6A CDS//intron       -
chr13:23910777-23910778(-) m6A CDS//intron       24981863//22608085
chr13:23910852-23910853(-) m6A CDS//intron       24981863//22608085
chr13:23910862-23910863(-) m6A CDS//intron       24981863//22608085
chr13:23911267-23911268(-) m6A CDS//intron       24981863
chr13:23911302-23911303(-) m6A CDS//intron       24981863
chr13:23911331-23911332(-) m6A CDS//intron       24981863
chr13:23911351-23911352(-) m6A CDS//intron       24981863
chr13:23911380-23911381(-) m6A CDS//intron       24981863
chr13:23911852-23911853(-) m6A CDS//intron       22608085
chr13:23911868-23911869(-) m6A CDS//intron       22608085
chr13:23911885-23911886(-) m6A CDS//intron       22608085
chr13:23911930-23911931(-) m6A CDS//intron       24981863//22608085
chr13:23911946-23911947(-) m6A CDS//intron       24981863//22608085
chr13:23911959-23911960(-) m6A CDS//intron       24981863//22608085
chr13:23912092-23912093(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23912225-23912226(-) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr13:23912272-23912273(-) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr13:23912310-23912311(-) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr13:23912376-23912377(-) m6A CDS//intron       24209618//24981863//22608085
chr13:23912422-23912423(-) m6A CDS//intron       24209618//24981863//22608085
chr13:23912430-23912431(-) m6A CDS//intron       24209618//24981863//22608085
chr13:23912441-23912442(-) m6A CDS//intron       24209618//24981863//22608085
chr13:23912488-23912489(-) m6A CDS//intron       24284625//24209618//24981863//22608085
chr13:23912494-23912495(-) m6A CDS//intron       24284625//24209618//24981863//22608085
chr13:23912540-23912541(-) m6A CDS//intron       24981863//22608085
chr13:23912580-23912581(-) m6A CDS//intron       24981863//22608085
chr13:23912755-23912756(-) m6A CDS//intron       22608085
chr13:23912793-23912794(-) m6A CDS//intron       24981863//22608085
chr13:23912840-23912841(-) m6A CDS//intron       24981863//22608085
chr13:23912907-23912908(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23912974-23912975(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23913066-23913067(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23913090-23913091(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr13:23913157-23913158(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23913184-23913185(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23913196-23913197(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23913233-23913234(-) m6A CDS//intron       24981863//22608085
chr13:23913244-23913245(-) m6A CDS//intron       24981863//22608085
chr13:23913263-23913264(-) m6A CDS//intron       24981863//22608085
chr13:23913404-23913405(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913457-23913458(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913482-23913483(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913503-23913504(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913574-23913575(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr13:23913649-23913650(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913671-23913672(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913688-23913689(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913726-23913727(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913740-23913741(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913763-23913764(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23913847-23913848(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr13:23913955-23913956(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23913967-23913968(-) m6A CDS//intron       24981863//27773535//22608085
chr13:23914086-23914087(-) m6A CDS//intron       24981863//22608085
chr13:23914135-23914136(-) m6A CDS//intron       24981863//22608085
chr13:23914176-23914177(-) m6A CDS//intron       24981863//22608085
chr13:23914283-23914284(-) m6A CDS//intron       22608085
chr13:23914299-23914300(-) m6A CDS//intron       22608085
chr13:23914336-23914337(-) m6A CDS//intron       22608085
chr13:23914626-23914627(-) m6A CDS//intron       22608085
chr13:23914750-23914751(-) m6A CDS//intron       24981863//22608085
chr13:23914803-23914804(-) m6A CDS//intron       24981863//22608085
chr13:23914858-23914859(-) m6A CDS//intron       24981863//22608085
chr13:23914879-23914880(-) m6A CDS//intron       24981863//22608085
chr13:23915052-23915053(-) m6A CDS//intron       24981863//22608085
chr13:23915062-23915063(-) m6A CDS//intron       24981863//22608085
chr13:23915078-23915079(-) m6A CDS//intron       24981863//22608085
chr13:23915111-23915112(-) m6A CDS//intron       24981863//22608085
chr13:23915149-23915150(-) m6A CDS//intron       22608085
chr13:23915476-23915477(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915489-23915490(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915557-23915558(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915566-23915567(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915577-23915578(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915598-23915599(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr13:23915705-23915706(-) m6A CDS//intron       24981863//22608085
chr13:23928985-23928986(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23929013-23929014(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23929290-23929291(-) m6A 5'UTR//CDS       24284625//27773535//22608085
chr13:23929302-23929303(-) m6A 5'UTR//CDS       24284625//27773535//22608085
chr13:23929511-23929512(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:23929582-23929583(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:23929663-23929664(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:23929690-23929691(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:23929724-23929725(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:23929766-23929767(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23929774-23929775(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:23929839-23929840(-) m6A 5'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr13:23929945-23929946(-) m6A 5'UTR//CDS       24284625//24981863//26404942//22608085
chr13:23929972-23929973(-) m6A 5'UTR//CDS       24284625//24981863//26404942//22608085
chr13:23930016-23930017(-) m6A 5'UTR//CDS       24284625//24981863//22608085
chr13:23930024-23930025(-) m6A 5'UTR//CDS       24284625//24981863//22608085
chr13:23930092-23930093(-) m6A 5'UTR//CDS       24284625//24981863
chr13:23932521-23932522(-) Am 5'UTR//CDS       -
chr13:23942552-23942553(-) m6A 5'UTR//CDS       -
chr13:23942580-23942581(-) m6A 5'UTR//CDS       -
chr13:23942611-23942612(-) m6A 5'UTR//CDS       -
chr13:23945245-23945246(-) m6A CDS//intron       -
chr13:23945271-23945272(-) Y CDS//intron       26075521
chr13:23985361-23985362(-) m6A CDS       24981863
chr13:23985371-23985372(-) m6A CDS       24981863//22608085
chr13:23985401-23985402(-) m6A 5'UTR       24981863//22608085
chr13:23985437-23985438(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985443-23985444(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985480-23985481(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985514-23985515(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985529-23985530(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985601-23985602(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985641-23985642(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985675-23985676(-) m6A 5'UTR       25456834//24981863//22608085
chr13:23985745-23985746(-) m6A 5'UTR       22608085
chr13:23985782-23985783(-) m6A 5'UTR       22608085
chr13:24007774-24007775(-) m6A 5'UTR       25456834//24981863//22608085
chr13:24007788-24007789(-) m6A 5'UTR       25456834//24981863//22608085
chr13:24007811-24007812(-) m6A 5'UTR       25456834//22608085
chr13:24007826-24007827(-) m6A 5'UTR       25456834//22608085
chr13:24007844-24007845(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-548b-5p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
SACS
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-548b-5p
Interactor2: SACS

Evidence Support:


Prediction-Evidence miRDB
Support Database ViRBase

References:


PMID 33201341 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description By custom target prediction, a panel of miRNA sequences able to recognize the SARS-CoV-2 sequence was collected. Only targets with a very high score (95-100) were retained for further analyses.

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