Basic Information:

  VIRBase ID:  

HHID00105027

  Virus:  

SARS-CoV-2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      CDK6-AS1:  NR_110086          CCL3:  NR_168494     

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Interactor Information:

	Interactor1	Interactor2
Symbol	CDK6-AS1	CCL3
miRBase Accession/Entrez ID	101927497	6348
Organism	Homo sapiens	Homo sapiens
Category	lncRNA	mRNA
Alias	BALR-2	G0S19-1//LD78ALPHA//MIP-1-alpha//MIP1A//SCYA3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCL3	chr17:34416799-34416800(-) m6A exon//intron       26404942 chr17:34416836-34416837(-) m6A exon//intron       26404942 chr17:34416843-34416844(-) m6A exon//intron       26404942 chr17:34417469-34417470(-) m6A 5'UTR//exon       26404942 chr17:34417482-34417483(-) m6A 5'UTR//exon       26404942 chr17:34417493-34417494(-) m6A exon       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CDK6-AS1	Exosome Blood     -
	CCL3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: CDK6-AS1
Interactor2: CCL3

Evidence Support:

Prediction-Evidence	LncRNA2Target
Support Database	ViRBase

References:

PMID	33520952	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	None	Interactor2 expression	None
Description	We identified a total of 24 cytokine-lncRNA relationships using LncRNA2Target (Table 2). The most significant lncRNAs associated with COVID-19 cytokine storm cytokines, accompanied by lncRNA target prediction analysis using average ndG values.