Detail Information

Basic Information:


  VIRBase ID:  

HHID00105006

  Virus:  

SARS-CoV-2

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      DRAIC:           IL2:      

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Interactor Information:


Interactor1 Interactor2
Symbol DRAIC IL2
miRBase
Accession/Entrez ID
145837 3558
Organism Homo sapiens Homo sapiens
Category lncRNA mRNA
Alias - IL-2//lymphokine//TCGF

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DRAIC
chr15:69858379(+) A-I      intronic
chr15:69860434(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DRAIC
chr15:69863604-69863605(+) m6A exon       24981863
chr15:69863618-69863619(+) m6A exon       24981863
chr15:69863659-69863660(+) m6A exon       24981863
chr15:69863666-69863667(+) m6A exon       24981863
chr15:69863732-69863733(+) m6A exon       24981863
IL2
chr4:123372952-123372953(-) m6A CDS//exon       26404942
chr4:123372977-123372978(-) m6A CDS//exon       26404942
chr4:123373007-123373008(-) m6A CDS//exon       26404942
chr4:123374870-123374871(-) m6A CDS//exon       26404942
chr4:123374904-123374905(-) m6A CDS//exon       26404942
chr4:123374912-123374913(-) m6A CDS//exon       26404942
chr4:123374925-123374926(-) m6A CDS//exon       26404942
chr4:123374963-123374964(-) m6A CDS//exon       26404942
chr4:123374969-123374970(-) m6A CDS//exon       26404942
chr4:123374993-123374994(-) m6A CDS//exon       26404942
chr4:123374999-123375000(-) m6A CDS//exon       26404942
chr4:123377507-123377508(-) m6A CDS//exon       26404942
chr4:123377539-123377540(-) m6A CDS//exon       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DRAIC
Exosome Blood     -
IL2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: DRAIC
Interactor2: IL2

Evidence Support:


Prediction-Evidence LncRNA2Target
Support Database ViRBase

References:


PMID 33520952 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression None
Description We identified a total of 24 cytokine-lncRNA relationships using LncRNA2Target (Table 2). The most significant lncRNAs associated with COVID-19 cytokine storm cytokines, accompanied by lncRNA target prediction analysis using average ndG values.

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